RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MRPL36Q9P0J6 103 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 MRPL27Q9P0M9 148 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 TIMM8BQ9Y5J9 83 aaPredicted RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 PSMB11A5LHX3 300 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 MOSP00540 346 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 SLC25A5P05141 298 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 CCL3L1P16619 93 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 SLC25A48Q6ZT89 311 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 MBD6Q96DN6 1003 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 SAP30LQ9HAJ7 183 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 DKK4Q9UBT3 224 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 RPUSD1Q9UJJ7 312 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 TRAV9-2A0A087WT02 112 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 IGHV3-21A0A0B4J1V1 117 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 PRB4P10163 310 aaPredicted RBP14.12□□□□□ -0.15
TRAM1-201ENST00000262213 DIAPH2-AS1Q14236 149 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 RPRMLQ8N4K4 120 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 BET1LQ9NYM9 111 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 ZNF137PP52743 207 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 DCHS1Q96JQ0 3298 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 PKDREJQ9NTG1 2253 aa14.12□□□□□ -0.15
TRAM1-201ENST00000262213 APOA2P02652 100 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 WT1-ASQ06250 92 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 LINC00305Q7Z4B0 112 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 ZCCHC24Q8N2G6 241 aaKnown RBP14.11□□□□□ -0.15
TRAM1-201ENST00000262213 PNKDQ8N490 385 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 H0Y8G0 127 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 CCL8P80075 99 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 OR1B1Q8NGR6 318 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 RNASE8Q8TDE3 154 aaKnown RBP14.11□□□□□ -0.15
TRAM1-201ENST00000262213 NDUFA4L2Q9NRX3 87 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 PGPA6NDG6 321 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 IGHV1-46P01743 117 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 SEM1Q6ZVN7 128 aa14.11□□□□□ -0.15
TRAM1-201ENST00000262213 MCRIP2Q9BUT9 160 aaKnown RBP14.11□□□□□ -0.15
TRAM1-201ENST00000262213 ZNF430Q9H8G1 570 aaPredicted RBP14.11□□□□□ -0.15
TRAM1-201ENST00000262213 GLRXP35754 106 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 RUSC1-AS1Q66K80 236 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 WIPF2Q8TF74 440 aaPredicted RBP14.1□□□□□ -0.15
TRAM1-201ENST00000262213 FXYD5Q96DB9 178 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 PGLYRP4Q96LB8 373 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 ZNF714Q96N38 554 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 CNOT1A5YKK6 2376 aaKnown RBP14.1□□□□□ -0.15
TRAM1-201ENST00000262213 TOX4O94842 621 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 LEMD1Q68G75 181 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 ZNF474Q6S9Z5 364 aaPredicted RBP14.1□□□□□ -0.15
TRAM1-201ENST00000262213 PDPNQ86YL7 162 aa14.1□□□□□ -0.15
TRAM1-201ENST00000262213 C2orf70A6NJV1 201 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 HIST1H1EP10412 219 aaKnown RBP14.09□□□□□ -0.15
TRAM1-201ENST00000262213 BPIFB3P59826 476 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 HCP5Q6MZN7 132 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 LINC00322Q6ZN03 302 aaPredicted RBP14.09□□□□□ -0.15
TRAM1-201ENST00000262213 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
TRAM1-201ENST00000262213 IGHV2-26A0A0B4J1V2 119 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 FAM231DQ6ZW35 169 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 OR1L4Q8NGR5 311 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 ORAOV1Q8WV07 137 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 CACNG8Q8WXS5 425 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 URB1-AS1Q96HZ7 61 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 COX11Q9Y6N1 276 aa14.09□□□□□ -0.15
TRAM1-201ENST00000262213 EP300Q09472 2414 aaPredicted RBP14.09□□□□□ -0.15
TRAM1-201ENST00000262213 TCRBV4S1A1TA0A5B7 111 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 H0YJW9 148 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF788Q6ZQV5 615 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 SSX8Q7RTT4 187 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF738Q8NE65 137 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 FAM222BQ8WU58 562 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 H1FXQ92522 213 aaKnown RBP14.08□□□□□ -0.16
TRAM1-201ENST00000262213 MRPS16Q9Y3D3 137 aaKnown RBP14.08□□□□□ -0.16
TRAM1-201ENST00000262213 IGKV1D-37A0A075B6S9 117 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 TRAV17A0A0B4J275 112 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 hADV38S2A0JD32 116 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 hDV102S1A0JD36 115 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 C22orf34Q6ZV56 151 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 ASCL3Q9NQ33 180 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 TPSG1Q9NRR2 321 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 EPDR1Q9UM22 224 aa14.08□□□□□ -0.16
TRAM1-201ENST00000262213 OR4C46A6NHA9 309 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF138P52744 262 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 OSR1Q8TAX0 266 aaPredicted RBP14.07□□□□□ -0.16
TRAM1-201ENST00000262213 TMEM70Q9BUB7 260 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 IGHV3-72A0A0B4J1Y9 119 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 SP9P0CG40 484 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 CA7P43166 264 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 KLF5Q13887 457 aaPredicted RBP14.07□□□□□ -0.16
TRAM1-201ENST00000262213 RASL11AQ6T310 242 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 OR10X1Q8NGY0 326 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF596Q8TC21 504 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
TRAM1-201ENST00000262213 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 SLC25A17O43808 307 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 ENSAO43768 121 aaKnown RBP14.06□□□□□ -0.16
TRAM1-201ENST00000262213 UBE2V1Q13404 147 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 DEFB109BQ30KR1 87 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 TMEM177Q53S58 311 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 OR4F17Q8NGA8 305 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms