RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 REC114Q7Z4M0 266 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 OR1S2Q8NGQ3 325 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 NPIPB3Q92617 1050 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 ST6GAL2Q96JF0 529 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 A8MWP6 167 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 NDUFA4O00483 81 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 CST7O76096 145 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 SLURP1P55000 103 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 YPEL3P61236 119 aaPredicted RBP10.8□□□□□ -0.68
VPS25-201ENST00000253794 HBG1P69891 147 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 HBG2P69892 147 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 RELQ04864 619 aaPredicted RBP10.8□□□□□ -0.68
VPS25-201ENST00000253794 SLC38A11Q08AI6 406 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 RPEL1Q2QD12 228 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 C1QL4Q86Z23 238 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 TCTE3Q8IZS6 198 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 UBAC2Q8NBM4 344 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 ACY3Q96HD9 319 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 AQP10Q96PS8 301 aa10.8□□□□□ -0.68
VPS25-201ENST00000253794 IGKV1OR2-108A0A075B7D4 117 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 OR2C1O95371 312 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
VPS25-201ENST00000253794 OR10J1P30954 320 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 ZNF600Q6ZNG1 722 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
VPS25-201ENST00000253794 TRGV9Q99603 122 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 NPVFQ9HCQ7 196 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
VPS25-201ENST00000253794 HSPB11Q9Y547 144 aa10.79□□□□□ -0.68
VPS25-201ENST00000253794 ELLP55199 621 aaPredicted RBP10.78□□□□□ -0.68
VPS25-201ENST00000253794 NHLH2Q02577 135 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 FAM106AQ4KMX7 169 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 TMEM217Q8N7C4 229 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 TMEM190Q8WZ59 177 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 SIGLEC8Q9NYZ4 499 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 TNFSF18Q9UNG2 199 aa10.78□□□□□ -0.68
VPS25-201ENST00000253794 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 RNF222A6NCQ9 220 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 OVOL1O14753 267 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 TOMM40O96008 361 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 AKR1C1Q04828 323 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 TIGITQ495A1 244 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 OR5C1Q8NGR4 320 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 RCC1LQ96I51 464 aaKnown RBP10.77□□□□□ -0.69
VPS25-201ENST00000253794 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 ZC4H2Q9NQZ6 224 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 UQCC1Q9NVA1 299 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 MGAM2Q2M2H8 2515 aa10.77□□□□□ -0.69
VPS25-201ENST00000253794 ZFP92A6NM28 416 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 K7EMT4 169 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 WIPF1O43516 503 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 FABP1P07148 127 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 TEPPQ6URK8 271 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 UNQ9165/PRO28630Q6UXU0 137 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 IL34Q6ZMJ4 242 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 ZNF546Q86UE3 836 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 AKAP14Q86UN6 197 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 OR9G4Q8NGQ1 327 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
VPS25-201ENST00000253794 WDR83OSQ9Y284 106 aa10.76□□□□□ -0.69
VPS25-201ENST00000253794 FXYD6-FXYD2A0A087WZ82 144 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 CFDP00746 253 aaPredicted RBP10.75□□□□□ -0.69
VPS25-201ENST00000253794 NUP62P37198 522 aaPredicted RBP10.75□□□□□ -0.69
VPS25-201ENST00000253794 SELENOTP62341 195 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 INO80EQ8NBZ0 244 aaPredicted RBP10.75□□□□□ -0.69
VPS25-201ENST00000253794 Q8WTZ3 238 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 ATP5SQ99766 215 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
VPS25-201ENST00000253794 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
VPS25-201ENST00000253794 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
VPS25-201ENST00000253794 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS25-201ENST00000253794 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 SMCO3A2RU48 225 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 SMLR1H3BR10 107 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 MPDU1O75352 247 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 DFFBO76075 338 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 RD3LP0DJH9 198 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 PSG1P11464 419 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 CD33P20138 364 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 INSL3P51460 131 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 ZNF90Q03938 601 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 ZNF345Q14585 488 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 OR11H4Q8NGC9 324 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 OR51G1Q8NGK1 321 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 MARC2Q969Z3 335 aa10.74□□□□□ -0.69
VPS25-201ENST00000253794 IGHV3-35A0A0C4DH35 117 aa10.73□□□□□ -0.69
VPS25-201ENST00000253794 WI2-2373I1.2A0A1W2PRP0 233 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms