RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MLANAQ16655 118 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 ACP7Q6ZNF0 438 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 ANKHD1Q8IWZ3 2542 aaKnown RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 KLF17Q5JT82 389 aaPredicted RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 DCAF10Q5QP82 559 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 CLEC19AQ6UXS0 136 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 LCTP09848 1927 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 HOXB1P14653 301 aaPredicted RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 PLA2G5P39877 138 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 IGKV1-12A0A0C4DH73 117 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 IGKV1D-12P01611 117 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 PSG7Q13046 419 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 ZNF257Q9Y2Q1 563 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 A0A1W2PRE2 83 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 LIPFP07098 398 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 HAPLN4Q86UW8 402 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 STPG4Q8N801 248 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 TMEM171Q8WVE6 324 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 CLEC7AQ9BXN2 247 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 Q8TAT8 98 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 C11orf44Q8N8P7 122 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 E9PLN8 166 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 C16orf97H3BN30 126 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 PET117Q6UWS5 81 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 BRCA1P38398 1863 aaKnown RBP6.27□□□□□ -1.41
RIF1-201ENST00000243326 OR52E5Q8NH55 327 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 CCL21O00585 134 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 COX6CP09669 75 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 IGKV1D-33P01593 117 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 IGKV1-33P01594 117 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 C19orf24Q9BVV8 132 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
RIF1-201ENST00000243326 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
RIF1-201ENST00000243326 CTHRC1Q96CG8 243 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 RAX2Q96IS3 184 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 CD69Q07108 199 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 FAM27E3Q08E93 113 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 PSG3Q16557 428 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 NPFFR1Q9GZQ6 430 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 COQ2Q96H96 371 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 NPFFO15130 113 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 MLNRO43193 412 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 TMEM50AO95807 157 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 IGHMP01871 453 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
RIF1-201ENST00000243326 MGST2Q99735 147 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 SNHG12Q9BXW3 62 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 SS18L1O75177 396 aaPredicted RBP6.26□□□□□ -1.41
RIF1-201ENST00000243326 MFAP4P55083 255 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 MEF2CQ06413 473 aaPredicted RBP6.26□□□□□ -1.41
RIF1-201ENST00000243326 EBLN2Q6P2I7 272 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 ZPBPQ9BS86 351 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 TNS1Q9HBL0 1735 aaKnown RBP6.26□□□□□ -1.41
RIF1-201ENST00000243326 ATP5G2Q06055 141 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 TSKUQ8WUA8 353 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 FER1L6-AS1Q8NA97 138 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 PTPRDP23468 1912 aa6.26□□□□□ -1.41
RIF1-201ENST00000243326 SMAD7O15105 426 aaKnown RBP6.25□□□□□ -1.41
RIF1-201ENST00000243326 TCRAP04437 139 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 UCP1P25874 307 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 PSG9Q00887 426 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 ACTL10Q5JWF8 245 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 CFHR5Q9BXR6 569 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TNRC6AQ8NDV7 1962 aaKnown RBP6.25□□□□□ -1.41
RIF1-201ENST00000243326 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 PPIAL4CA0A0B4J2A2 164 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 PPIAL4GP0DN37 164 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 ORAOV1Q8WV07 137 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 SEPSECSQ9HD40 501 aaKnown RBP6.25□□□□□ -1.41
RIF1-201ENST00000243326 EPDR1Q9UM22 224 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 CECR9P0C854 216 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 PDLIM4P50479 330 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 OCIAD2Q56VL3 154 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 HOXA3O43365 443 aaPredicted RBP6.25□□□□□ -1.41
RIF1-201ENST00000243326 KLRD1Q13241 179 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 K7ERJ3 54 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TNFSF13O75888 250 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 UMODP07911 640 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TSPOP30536 169 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 OR10J3Q5JRS4 329 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
RIF1-201ENST00000243326 TRAV21A0A0B4J279 112 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 NPIPB13A6NJU9 1138 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 NPIPB5A8MRT5 1133 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 NPIPB11E5RHQ5 1161 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TSPAN7P41732 249 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 FAM214BQ7L5A3 538 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 C5orf30Q96GV9 206 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 RNF115Q9Y4L5 304 aa6.25□□□□□ -1.41
RIF1-201ENST00000243326 TRBV9A0A0B4J1U6 114 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 PPP1R32Q7Z5V6 425 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 IGKV1-5P01602 117 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms