RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-201ENST00000238688 TCRBV4S1A1TA0A5B7 111 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 BRI3O95415 125 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 BCL2P10415 239 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 DEFA4P12838 97 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 TAS2R45P59539 299 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 KLF17Q5JT82 389 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-201ENST00000238688 OR4X1Q8NH49 305 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 SGMS2Q8NHU3 365 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 SCRT1Q9BWW7 348 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 EIF5A2Q9GZV4 153 aaKnown RBP10.43□□□□□ -0.74
SLIRP-201ENST00000238688 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
SLIRP-201ENST00000238688 RNF24Q9Y225 148 aa10.43□□□□□ -0.74
SLIRP-201ENST00000238688 FCN1O00602 326 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 CXorf1O96002 111 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 AREGP15514 252 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 S100A7P31151 101 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 FCGR2BP31994 310 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-201ENST00000238688 AKIRIN2Q53H80 203 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 CYP2G1PQ6ZSU1 146 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 OR5R1Q8NH85 324 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-201ENST00000238688 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 TXN2Q99757 166 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 VAX2Q9UIW0 290 aa10.42□□□□□ -0.74
SLIRP-201ENST00000238688 IGHV7-81A0A0B4J1V7 117 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 LOC102723971A0A1B0GUV8 181 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 F8W036 122 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 TMEM250H0YL14 139 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 YIF1AO95070 293 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 SNAPINO95295 136 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 OR5G3P0C626 314 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 STAG3L2P0CL84 134 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 STAG3L3P0CL85 134 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 NPBWR1P48145 328 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 PLP1P60201 277 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 ZNF726P1Q15940 193 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 SLC35E3Q7Z769 313 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 BCL6BQ8N143 479 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-201ENST00000238688 C5orf56Q8N8D9 126 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 STXBP6Q8NFX7 210 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 FAM110DQ8TAY7 271 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-201ENST00000238688 C17orf50Q8WW18 174 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 LINC00052Q96N35 136 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 WNT10AQ9GZT5 417 aa10.41□□□□□ -0.74
SLIRP-201ENST00000238688 FNDC4Q9H6D8 234 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-201ENST00000238688 ZFP92A6NM28 416 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 H3BUA1 57 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 I3L2K1 104 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 SFTA3P0C7M3 94 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 LINC00869P0C866 280 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 OR10J1P30954 320 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 RND2P52198 227 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 MIC13Q5XKP0 118 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 VN1R17PQ8TDU5 208 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 MISP3Q96FF7 219 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 ACY3Q96HD9 319 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 VSIRQ9H7M9 311 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 TMEM167BQ9NRX6 74 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 FUT9Q9Y231 359 aa10.4□□□□□ -0.74
SLIRP-201ENST00000238688 IGLV11-55A0A075B6I3 123 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 A0A0U1RQK1 487 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 CLN5O75503 358 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-201ENST00000238688 SCGB2A2Q13296 93 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 FAM74A3Q4VXF1 159 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 FAM122CQ6P4D5 195 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 SSX3Q99909 188 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 NKX6-2Q9C056 277 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-201ENST00000238688 SLC25A22Q9H936 323 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 DNAJC4Q9NNZ3 241 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 TNFRSF19Q9NS68 423 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 TECRQ9NZ01 308 aaKnown RBP10.39□□□□□ -0.75
SLIRP-201ENST00000238688 RFNGQ9Y644 331 aa10.39□□□□□ -0.75
SLIRP-201ENST00000238688 SOX21Q9Y651 276 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-201ENST00000238688 A6NDX4 124 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 PDE6DO43924 150 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 APOC3P02656 99 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 IGF1P05019 195 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 MFAP2P55001 183 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 MFAP4P55083 255 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 SOHLH1Q5JUK2 328 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 FAM209BQ5JX69 171 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 SIGLECL1Q8N7X8 197 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 PIFOQ8TCI5 191 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 PRDM13Q9H4Q3 707 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 GNG13Q9P2W3 67 aa10.38□□□□□ -0.75
SLIRP-201ENST00000238688 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 K7EIM0 57 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 HAX1O00165 279 aa10.37□□□□□ -0.75
SLIRP-201ENST00000238688 REG1AP05451 166 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms