RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 MS4A6AQ9H2W1 248 aa14.38□□□□□ -0.11
CDKN1B-201ENST00000228872 C7orf69Q9H7B7 122 aa14.38□□□□□ -0.11
CDKN1B-201ENST00000228872 CD24P25063 80 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 CD177Q8N6Q3 437 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 OR9G1Q8NH87 305 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 OR51B2Q9Y5P1 312 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 GPR183P32249 361 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 HBBP68871 147 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 ZNF329Q86UD4 541 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 MRPL32Q9BYC8 188 aaKnown RBP14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 CXXC4Q9H2H0 198 aa14.37□□□□□ -0.11
CDKN1B-201ENST00000228872 SMIM21Q3B7S5 101 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 PET117Q6UWS5 81 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 TCF24Q7RTU0 167 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 MCRIP2Q9BUT9 160 aaKnown RBP14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 C7orf71A4D174 169 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 DEFB109BQ30KR1 87 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 FER1L6-AS1Q8NA97 138 aa14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 KLF14Q8TD94 323 aaPredicted RBP14.36□□□□□ -0.11
CDKN1B-201ENST00000228872 NBEAP1P0C6P0 100 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 LOXL3P58215 753 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 MLANAQ16655 118 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 MAP1LC3CQ9BXW4 147 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 DEFB127Q9H1M4 99 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 RPH3ALQ9UNE2 315 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 SPENQ96T58 3664 aaKnown RBP14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 GAGE10A6NGK3 116 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 FOXE3Q13461 319 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 UFSP1Q6NVU6 142 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 C2orf91Q6ZV80 131 aa14.35□□□□□ -0.11
CDKN1B-201ENST00000228872 CEP250Q9BV73 2442 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 PSMB11A5LHX3 300 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 CIDEAO60543 219 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 PYYP10082 97 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 H1FXQ92522 213 aaKnown RBP14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 LIPFP07098 398 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 UTF1Q5T230 341 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 CLEC2AQ6UVW9 174 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 OR1B1Q8NGR6 318 aa14.34□□□□□ -0.11
CDKN1B-201ENST00000228872 FAM231BA6NCW3 169 aa14.33□□□□□ -0.12
CDKN1B-201ENST00000228872 OR5AL1P0C617 328 aa14.33□□□□□ -0.12
CDKN1B-201ENST00000228872 PRDX2P32119 198 aa14.33□□□□□ -0.12
CDKN1B-201ENST00000228872 RNFT1Q5M7Z0 435 aa14.33□□□□□ -0.12
CDKN1B-201ENST00000228872 PRCDQ00LT1 54 aa14.33□□□□□ -0.12
CDKN1B-201ENST00000228872 H0Y8G0 127 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 COX8AP10176 69 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 PAX2Q02962 417 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 LEAP2Q969E1 77 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 PMCHL2Q9BQD1 86 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 G3V4G9 280 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 F2RL2O00254 374 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 ARF6P62330 175 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 GNG5P63218 68 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 SEC11AP67812 179 aa14.32□□□□□ -0.12
CDKN1B-201ENST00000228872 TRAV17A0A0B4J275 112 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 PPIAL4DF5H284 164 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 KLK10O43240 276 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 HTR1DP28221 377 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 FOXC1Q12948 553 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 RPP21Q9H633 154 aaKnown RBP14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 FNDC4Q9H6D8 234 aaPredicted RBP14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 SPRR3Q9UBC9 169 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 LINC01545Q5VT33 79 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 LRRC29Q8WV35 223 aa14.31□□□□□ -0.12
CDKN1B-201ENST00000228872 TRGV5A0A0B4J1U4 118 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 SAA2P0DJI9 122 aaPredicted RBP14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 POU2AF1Q16633 256 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 CR1LQ2VPA4 569 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 GTF2H5Q6ZYL4 71 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 BPIFA4PQ86YQ2 179 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 GTSF1Q8WW33 167 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF714Q96N38 554 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 HSPB8Q9UJY1 196 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF257Q9Y2Q1 563 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 SOX21Q9Y651 276 aaPredicted RBP14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 RNASE2P10153 161 aaKnown RBP14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 CD69Q07108 199 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 WFDC8Q8IUA0 241 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 PGLYRP4Q96LB8 373 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 JMJD8Q96S16 334 aa14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF430Q9H8G1 570 aaPredicted RBP14.3□□□□□ -0.12
CDKN1B-201ENST00000228872 SNAI2O43623 268 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 APOA2P02652 100 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF137PP52743 207 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 ZNF138P52744 262 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 CT45A1Q5HYN5 189 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 IGFL3Q6UXB1 125 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 CT45A3Q8NHU0 189 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 SGK494Q96LW2 274 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 BOD1L1Q8NFC6 3051 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 IGKV1D-17A0A075B6S4 117 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 UPK2O00526 184 aa14.29□□□□□ -0.12
CDKN1B-201ENST00000228872 COX7A2P2O60397 106 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms