RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 A0A0G2JNJ9 132 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 NDPQ00604 133 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 SLC25A2Q9BXI2 301 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 Q9UFV3 132 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
COL1A1-201ENST00000225964 NHLRC3Q5JS37 347 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 UBE2E2Q96LR5 201 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 TIMP3P35625 211 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 FGFBP3Q8TAT2 258 aa10.96□□□□□ -0.65
COL1A1-201ENST00000225964 TMEM8BA6NDV4 472 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 DPM2O94777 84 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 LINC00271P0C7V0 271 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 GATD1Q8NB37 220 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 HEATR5BQ9P2D3 2071 aa10.96□□□□□ -0.66
COL1A1-201ENST00000225964 IGLV3-12A0A075B6K2 115 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 LINC01356Q8N9X3 169 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 WNK3Q9BYP7 1800 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 A0A1B0GTI1 187 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 DTX1Q86Y01 620 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 JPT2Q9H910 190 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 LINC00114Q6XXX2 140 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 IGHV1-3A0A0C4DH29 117 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 A0A1B0GV90 55 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 TNFRSF14Q92956 283 aa10.95□□□□□ -0.66
COL1A1-201ENST00000225964 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 TMEM178BH3BS89 294 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 IGHV1-8P0DP01 117 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-201ENST00000225964 NTN3O00634 580 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-201ENST00000225964 IL18BPO95998 194 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 GGTLC3B5MD39 225 aa10.94□□□□□ -0.66
COL1A1-201ENST00000225964 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
COL1A1-201ENST00000225964 IGKCP01834 107 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 FCN3O75636 299 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-201ENST00000225964 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 TRBV7-1A0A0A6YYK4 115 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 HOXA3O43365 443 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-201ENST00000225964 GZMBP10144 247 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-201ENST00000225964 F2Z2F3 143 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 RPL23P62829 140 aaKnown RBP10.93□□□□□ -0.66
COL1A1-201ENST00000225964 CCL20P78556 96 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 MTURNQ8N3F0 131 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 PLSCR4Q9NRQ2 329 aa10.93□□□□□ -0.66
COL1A1-201ENST00000225964 C1QTNF9P0C862 333 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 PLNP26678 52 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 ZNF329Q86UD4 541 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 MBD3L1Q8WWY6 194 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 RNF166Q96A37 237 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 SRSF6Q13247 344 aaKnown RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 TRPM7Q96QT4 1865 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 TRAV8-4A0A0B4J246 113 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 TOMM40O96008 361 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 SELLP14151 372 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 Q0VFX4 171 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 M0R2P5 195 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 RPL36AP83881 106 aaKnown RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 CD300EQ496F6 205 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 MORN3Q6PF18 240 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 RPL36ALQ969Q0 106 aaKnown RBP10.92□□□□□ -0.66
COL1A1-201ENST00000225964 MESP1Q9BRJ9 268 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 DOCK3Q8IZD9 2030 aa10.92□□□□□ -0.66
COL1A1-201ENST00000225964 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 NAPSAO96009 420 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 EFNB3Q15768 340 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 F8WEM9 126 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 LAGE3Q14657 143 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 PAX4O43316 350 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 INSP01308 110 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 EXOC3-AS1Q8N2X6 119 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 H3BUT2 72 aa10.91□□□□□ -0.66
COL1A1-201ENST00000225964 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-201ENST00000225964 SHISA3A0PJX4 238 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 SERF1AO75920 110 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 ERCC8Q13216 396 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.66
COL1A1-201ENST00000225964 IGLV3-32A0A0A0MS00 114 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms