RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 IGLV11-55A0A075B6I3 123 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 K7EIM0 57 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 STAG3L2P0CL84 134 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 STAG3L3P0CL85 134 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 CYB5R2Q6BCY4 276 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 OR4X1Q8NH49 305 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 TMEM68Q96MH6 324 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 SEPSECSQ9HD40 501 aaKnown RBP14.3□□□□□ -0.12
VIM-201ENST00000224237 THYN1Q9P016 225 aa14.3□□□□□ -0.12
VIM-201ENST00000224237 FLNAP21333 2647 aaKnown RBP14.3□□□□□ -0.12
VIM-201ENST00000224237 ATP6V0E1O15342 81 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 TAGLN2P37802 199 aaKnown RBP14.29□□□□□ -0.12
VIM-201ENST00000224237 PSMB3P49720 205 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 ZNF90Q03938 601 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 FAM78BQ5VT40 261 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 SLC35E3Q7Z769 313 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 NANPQ8TBE9 248 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 RXFP4Q8TDU9 374 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 FANCD2OSQ96PS1 177 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 MANBALQ9NQG1 85 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 A6NDX4 124 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 CXorf1O96002 111 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 TMEM88Q6PEY1 159 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 TMPRSS5Q9H3S3 457 aa14.29□□□□□ -0.12
VIM-201ENST00000224237 M0QZK8 103 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 FSHBP01225 129 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 OR5G3P0C626 314 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 UNQ5815/PRO19632Q6UWF5 114 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 C16orf82Q7Z2V1 217 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 FAM110DQ8TAY7 271 aaPredicted RBP14.28□□□□□ -0.12
VIM-201ENST00000224237 GATAD1Q8WUU5 269 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 PFDN5Q99471 154 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 VAX2Q9UIW0 290 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 FUT9Q9Y231 359 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 TLN2Q9Y4G6 2542 aa14.28□□□□□ -0.12
VIM-201ENST00000224237 MDFIC2A0A1B0GVS7 189 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 AMY1AP04745 511 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 ARL14EPLP0DKL9 152 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 LY6EQ16553 131 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 ECSCRQ19T08 205 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 OR5T1Q8NG75 326 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 OR1L4Q8NGR5 311 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 RNF2Q99496 336 aa14.27□□□□□ -0.12
VIM-201ENST00000224237 PSMB11A5LHX3 300 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 SMAD7O15105 426 aaKnown RBP14.27□□□□□ -0.13
VIM-201ENST00000224237 CLN5O75503 358 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 SRP19P09132 144 aaKnown RBP14.27□□□□□ -0.13
VIM-201ENST00000224237 IGLC1P0CG04 106 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 AKIRIN2Q53H80 203 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 SPNS3Q6ZMD2 512 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 CBLN2Q8IUK8 224 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 FOXC2Q99958 501 aa14.27□□□□□ -0.13
VIM-201ENST00000224237 MRPL32Q9BYC8 188 aaKnown RBP14.27□□□□□ -0.13
VIM-201ENST00000224237 SH2D7A6NKC9 451 aaPredicted RBP14.26□□□□□ -0.13
VIM-201ENST00000224237 HIST1H1BP16401 226 aaKnown RBP14.26□□□□□ -0.13
VIM-201ENST00000224237 DEFB112Q30KQ8 113 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 SPATA31B1PQ5VZV4 182 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 C9orf139Q6ZV77 190 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 BCL6BQ8N143 479 aaPredicted RBP14.26□□□□□ -0.13
VIM-201ENST00000224237 TMEM37Q8WXS4 190 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 DNAJC4Q9NNZ3 241 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 SMCO4Q9NRQ5 59 aa14.26□□□□□ -0.13
VIM-201ENST00000224237 COX7A2P2O60397 106 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 TAS2R45P59539 299 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 MEF2BQ02080 365 aaPredicted RBP14.25□□□□□ -0.13
VIM-201ENST00000224237 SOHLH1Q5JUK2 328 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 MIR17HGQ75NE6 70 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 ZNF48Q96MX3 618 aaPredicted RBP14.25□□□□□ -0.13
VIM-201ENST00000224237 AKAP9Q99996 3911 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
VIM-201ENST00000224237 KLK9Q2XQG4 91 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 TECRQ9NZ01 308 aaKnown RBP14.25□□□□□ -0.13
VIM-201ENST00000224237 KLK9Q9UKQ9 250 aa14.25□□□□□ -0.13
VIM-201ENST00000224237 ELOA3CA0A087WX78 387 aaPredicted RBP14.24□□□□□ -0.13
VIM-201ENST00000224237 NDUFS6O75380 124 aaKnown RBP14.24□□□□□ -0.13
VIM-201ENST00000224237 C10orf113Q5VZT2 155 aa14.24□□□□□ -0.13
VIM-201ENST00000224237 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
VIM-201ENST00000224237 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
VIM-201ENST00000224237 TRAV30A0A087WSZ9 112 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 LINC01548A6NM66 108 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 OR2J3O76001 311 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 FABP1P07148 127 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 GCHFRP30047 84 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 MFAP4P55083 255 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 PQLC2Q6ZP29 291 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 GSX1Q9H4S2 264 aaPredicted RBP14.23□□□□□ -0.13
VIM-201ENST00000224237 DOK5Q9P104 306 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 C8orf88P0DMB2 117 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 PLP1P60201 277 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 RHEBQ15382 184 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 C9orf152Q5JTZ5 239 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 OR5R1Q8NH85 324 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 RPS10P5Q9NQ39 176 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
VIM-201ENST00000224237 C7orf77A4D0Y5 90 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 G3V318 75 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 GNG7O60262 68 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 PAGE4O60829 102 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms