RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 C4orf3Q8WVX3 66 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 TXN2Q99757 166 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 TMEM147Q9BVK8 224 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 MFFQ9GZY8 342 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 UQCC1Q9NVA1 299 aa10.1□□□□□ -0.79
PHGDH-220ENST00000641570 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 TRBV9A0A0B4J1U6 114 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 ANKRD34BA5PLL1 514 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 C1QBP02746 253 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 PF4P02776 101 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 GPR183P32249 361 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 ARL3P36405 182 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 RND2P52198 227 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 PAX9P55771 341 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 RELQ04864 619 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-220ENST00000641570 OR2F1Q13607 317 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 CLINT1Q14677 625 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 SPSB3Q6PJ21 355 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 C10orf99Q6UWK7 81 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 CLEC19AQ6UXS0 136 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 ZNF491Q8N8L2 437 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 OR5C1Q8NGR4 320 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 SCARB1Q8WTV0 552 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 BSCL2Q96G97 398 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-220ENST00000641570 ST6GAL2Q96JF0 529 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-220ENST00000641570 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 PEF1Q9UBV8 284 aaKnown RBP10.09□□□□□ -0.79
PHGDH-220ENST00000641570 HSPB11Q9Y547 144 aa10.09□□□□□ -0.79
PHGDH-220ENST00000641570 A0A0D9SG52 128 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 MFSD2BA6NFX1 497 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 OR2T8A6NH00 312 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 H0YIZ8 118 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 TMEM50AO95807 157 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 IGHV3-48P01763 117 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 LYL1P12980 280 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 ZP3P21754 424 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 S100A7P31151 101 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-220ENST00000641570 RPEL1Q2QD12 228 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 RNF152Q8N8N0 203 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 OR4F17Q8NGA8 305 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 OR4F4Q96R69 305 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 ATP5SQ99766 215 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 NPVFQ9HCQ7 196 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 S4R3C0 116 aa10.08□□□□□ -0.8
PHGDH-220ENST00000641570 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 HMSDA8MTL9 139 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 FNDC10F2Z333 226 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 I3L2K1 104 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 K7EIM0 57 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 M0QZ24 198 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 TAAR5O14804 337 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 CLN5O75503 358 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 YIF1AO95070 293 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 CLEC3BP05452 202 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 OR10J1P30954 320 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 MFAP2P55001 183 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 EIF5AP63241 154 aaKnown RBP10.07□□□□□ -0.8
PHGDH-220ENST00000641570 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 S100A7AQ86SG5 101 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 OR4X1Q8NH49 305 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 NPIPB3Q92617 1050 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 NARS2Q96I59 477 aaKnown RBP10.07□□□□□ -0.8
PHGDH-220ENST00000641570 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
PHGDH-220ENST00000641570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
PHGDH-220ENST00000641570 LINC01619G3V211 115 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 TGOLN2O43493 480 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
PHGDH-220ENST00000641570 HSPB1P04792 205 aaKnown RBP10.06□□□□□ -0.8
PHGDH-220ENST00000641570 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PHGDH-220ENST00000641570 FGF7P21781 194 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 NHLH2Q02577 135 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF502Q8TBZ5 544 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
PHGDH-220ENST00000641570 CUBNO60494 3623 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 MPDU1O75352 247 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 BMI1P35226 326 aa10.05□□□□□ -0.8
PHGDH-220ENST00000641570 EIF2B2P49770 351 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms