RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-245	ENST00000639702	PSG8	Q9UQ74	426 aa		10.15	□□□□□ -0.78
RBM39-245	ENST00000639702		B4DSR2	109 aa		10.15	□□□□□ -0.79
RBM39-245	ENST00000639702	RAMP3	O60896	148 aa		10.15	□□□□□ -0.79
RBM39-245	ENST00000639702	STAG3L3	P0CL85	134 aa		10.15	□□□□□ -0.79
RBM39-245	ENST00000639702	TPTE2P1	Q5T6R2	138 aa		10.15	□□□□□ -0.79
RBM39-245	ENST00000639702	VCX2	Q9H322	139 aa		10.15	□□□□□ -0.79
RBM39-245	ENST00000639702	TMEM178B	H3BS89	294 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	ATOH7	Q8N100	152 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	MTURN	Q8N3F0	131 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	NUDT11	Q96G61	164 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	SLC25A15	Q9Y619	301 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	CNTRL	Q7Z7A1	2325 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	FOXF2	Q12947	444 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	SPSB3	Q6PJ21	355 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	DTX1	Q86Y01	620 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	MBNL3	Q9NUK0	354 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	ORMDL2	Q53FV1	153 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	HEPN1	Q6WQI6	88 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	NABP1	Q96AH0	204 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	NXT2	Q9NPJ8	142 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	CCDC88C	Q9P219	2028 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	TRGV4	A0A0C4DH28	118 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	CRP	P02741	224 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	IGHV1-8	P0DP01	117 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	TOMM7	Q9P0U1	55 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	PDCD11	Q14690	1871 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	RPL23	P62829	140 aa	Known RBP	10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	NSUN5P1	Q3KNT7	163 aa		10.14	□□□□□ -0.79
RBM39-245	ENST00000639702	TMEM8B	A6NDV4	472 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	LYNX1	G3V0Z9	82 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	LYNX1	P0DP58	116 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	ID3	Q02535	119 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	MDS2	Q8NDY4	140 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	IGHV3OR16-8	A0A075B7F1	116 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	GNG5	P63218	68 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	TRBV7-9	A0A0J9YWB2	115 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	SLC25A20	O43772	301 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	ZNF585B	Q52M93	769 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	TMEM200B	Q69YZ2	307 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	BEND2	Q8NDZ0	799 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	UNC13C	Q8NB66	2214 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	SLC25A16	P16260	332 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	MUC21	Q5SSG8	566 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	FGFBP3	Q8TAT2	258 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	IMMP2L	Q96T52	175 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	RNF126	Q9BV68	326 aa		10.13	□□□□□ -0.79
RBM39-245	ENST00000639702	TRBV7-1	A0A0A6YYK4	115 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	UNQ6494/PRO21346	Q6UXR6	183 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	MBD3L3	A6NE82	208 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	FAM169B	Q8N8A8	192 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	VGLL1	Q99990	258 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	CYSLTR1	Q9Y271	337 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702		A0A0A6YYD4	124 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	TSPAN13	O95857	204 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	ZNF688	P0C7X2	276 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	NDUFA3	O95167	84 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	LINC01559	Q495D7	138 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	WDR83OS	Q9Y284	106 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	IGHV1-3	A0A0C4DH29	117 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702		A8MXK9	166 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702		F8VVB4	439 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702		F8VWA3	439 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	ATP5L2	Q7Z4Y8	100 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	GLMP	Q8WWB7	406 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	PRADC1	Q9BSG0	188 aa		10.12	□□□□□ -0.79
RBM39-245	ENST00000639702	EFNB3	Q15768	340 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	TDRD6	O60522	2096 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	GNLY	P22749	145 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	LCT	P09848	1927 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	MUC21	A0A0G2JKD1	596 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	MUC21	A0A140T8X8	626 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	SLC25A48	Q6ZT89	311 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	ZNF319	Q9P2F9	582 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	KIR3DL3	Q8N743	410 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	OTOF	Q9HC10	1997 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702		A0A0G2JNJ9	132 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	HBD	P02042	147 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	TMEM170A	Q8WVE7	144 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	USMG5	Q96IX5	58 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702		Q9UFV3	132 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	KNL1	Q8NG31	2342 aa		10.11	□□□□□ -0.79
RBM39-245	ENST00000639702	FAM223B	A6NKX1	122 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	FAM223A	Q8IWN6	122 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	EFNA2	O43921	213 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	IGHG3	P01860	377 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	CLPS	P04118	112 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	CD24	P25063	80 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	BTC	P35070	178 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	MBD3L1	Q8WWY6	194 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	TRGV9	Q99603	122 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	PGPEP1	Q9NXJ5	209 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702		Q0VFX4	171 aa		10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	CHCHD1	Q96BP2	118 aa	Known RBP	10.1	□□□□□ -0.79
RBM39-245	ENST00000639702	NEUROG3	Q9Y4Z2	214 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms