RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 UXS1Q8NBZ7 420 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 DTD1Q8TEA8 209 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 TMEM190Q8WZ59 177 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 NUDT15Q9NV35 164 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 MLXQ9UH92 298 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 OPRK1P41145 380 aa16.45■□□□□ 0.22
SCN1B-206ENST00000638536 TXN2Q99757 166 aa16.45■□□□□ 0.22
SCN1B-206ENST00000638536 ZNF207O43670 478 aaKnown RBP16.45■□□□□ 0.22
SCN1B-206ENST00000638536 SLC25A6P12236 298 aa16.45■□□□□ 0.22
SCN1B-206ENST00000638536 ASAH1Q13510 395 aa16.45■□□□□ 0.22
SCN1B-206ENST00000638536 HIPK2Q9H2X6 1198 aa16.45■□□□□ 0.22
SCN1B-206ENST00000638536 HUWE1Q7Z6Z7 4374 aaKnown RBP16.44■□□□□ 0.22
SCN1B-206ENST00000638536 CORTO00230 105 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 NDUFA4O00483 81 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 NUPL2O15504 423 aaKnown RBP16.44■□□□□ 0.22
SCN1B-206ENST00000638536 GNG7O60262 68 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 TMEM50AO95807 157 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 IAPPP10997 89 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 NPY1RP25929 384 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 Q8N1Y9 231 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 DUSP18Q8NEJ0 188 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 DYNLRB2Q8TF09 96 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 C20orf24Q9BUV8 137 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 MAGT1Q9H0U3 335 aa16.44■□□□□ 0.22
SCN1B-206ENST00000638536 ZNF785A8K8V0 405 aa16.43■□□□□ 0.22
SCN1B-206ENST00000638536 C8orf88P0DMB2 117 aa16.43■□□□□ 0.22
SCN1B-206ENST00000638536 COQ8AQ8NI60 647 aa16.43■□□□□ 0.22
SCN1B-206ENST00000638536 SEC22CQ9BRL7 303 aa16.43■□□□□ 0.22
SCN1B-206ENST00000638536 PIGBOS1A0A0B4J2F0 54 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 FAM240BA0A1B0GVZ2 78 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 IFNA10P01566 189 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 BTNL8Q6UX41 500 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 MITD1Q8WV92 249 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 WDR89Q96FK6 387 aaPredicted RBP16.42■□□□□ 0.22
SCN1B-206ENST00000638536 GAR1Q9NY12 217 aaKnown RBP16.42■□□□□ 0.22
SCN1B-206ENST00000638536 CACFD1Q9UGQ2 172 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 UFC1Q9Y3C8 167 aa16.42■□□□□ 0.22
SCN1B-206ENST00000638536 NPBWR1P48145 328 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 OR10C1Q96KK4 312 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 PALMDQ9NP74 551 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 U3KQ87 197 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 CLN5O75503 358 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 H2AFB2P0C5Z0 115 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 ELLP55199 621 aaPredicted RBP16.41■□□□□ 0.22
SCN1B-206ENST00000638536 LCN12Q6JVE5 192 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 PRSS54Q6PEW0 395 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 TMEM61Q8N0U2 210 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 OR4X1Q8NH49 305 aa16.41■□□□□ 0.22
SCN1B-206ENST00000638536 RNASEH2CQ8TDP1 164 aaKnown RBP16.41■□□□□ 0.22
SCN1B-206ENST00000638536 YIF1AO95070 293 aa16.4■□□□□ 0.22
SCN1B-206ENST00000638536 MZT2BQ6NZ67 158 aa16.4■□□□□ 0.22
SCN1B-206ENST00000638536 DAZ1Q9NQZ3 744 aaKnown RBP16.4■□□□□ 0.22
SCN1B-206ENST00000638536 TECRQ9NZ01 308 aaKnown RBP16.4■□□□□ 0.22
SCN1B-206ENST00000638536 MRPL27Q9P0M9 148 aaKnown RBP16.4■□□□□ 0.22
SCN1B-206ENST00000638536 SMAD5-AS1Q9Y6J3 95 aa16.4■□□□□ 0.22
SCN1B-206ENST00000638536 C15orf62A8K5M9 175 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 FAM90A26D6RGX4 464 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 RND2P52198 227 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 RELQ04864 619 aaPredicted RBP16.39■□□□□ 0.21
SCN1B-206ENST00000638536 TOMM20LQ6UXN7 152 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 OR4D5Q8NGN0 318 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 OR2K2Q8NGT1 345 aa16.39■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV3-49A0A0A0MS15 119 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 WRBO00258 174 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 CCSO14618 274 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 SYNGR2O43760 224 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 IGKV1-17P01599 117 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 ID3Q02535 119 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 TIGITQ495A1 244 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 B9D2Q9BPU9 175 aa16.38■□□□□ 0.21
SCN1B-206ENST00000638536 K7EMT4 169 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 SCAF4O95104 1147 aaKnown RBP16.37■□□□□ 0.21
SCN1B-206ENST00000638536 CD7P09564 240 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 POLR2GP62487 172 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCN1B-206ENST00000638536 NRARPQ7Z6K4 114 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 ZNF431Q8TF32 576 aaPredicted RBP16.37■□□□□ 0.21
SCN1B-206ENST00000638536 ZFAND3Q9H8U3 227 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 PUS1Q9Y606 427 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV3OR16-13A0A075B7E8 117 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV3-74A0A0B4J1X5 117 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 IFNA21P01568 189 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 IGLC1P0CG04 106 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 CD69Q07108 199 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 GUCA2BQ16661 112 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 TMEM116Q8NCL8 245 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 NPIPB3Q92617 1050 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 MARC2Q969Z3 335 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 ASCL2Q99929 193 aa16.37■□□□□ 0.21
SCN1B-206ENST00000638536 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
SCN1B-206ENST00000638536 RPS10-NUDT3A0A1W2PQS6 291 aa16.36■□□□□ 0.21
SCN1B-206ENST00000638536 IFNA4P05014 189 aa16.36■□□□□ 0.21
SCN1B-206ENST00000638536 H3BP45 60 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 MED6O75586 246 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 APOHP02749 345 aaPredicted RBP16.35■□□□□ 0.21
SCN1B-206ENST00000638536 IAH1Q2TAA2 248 aaPredicted RBP16.35■□□□□ 0.21
SCN1B-206ENST00000638536 ZNF600Q6ZNG1 722 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 SLC16A13Q7RTY0 426 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 NOXA1Q86UR1 476 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 ENKURQ8TC29 256 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 ACY3Q96HD9 319 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms