RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 A0A0D9SG52 128 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 A0A0G2JLM5 398 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 MFSD2BA6NFX1 497 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 I3L521 148 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 K7EIM0 57 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 ARPC5O15511 151 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 IFNA10P01566 189 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 NPY1RP25929 384 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.11
PNKP-224ENST00000631020 MISP3Q96FF7 219 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 C11orf1Q9H5F2 150 aa14.38□□□□□ -0.11
PNKP-224ENST00000631020 LSM5Q9Y4Y9 91 aaKnown RBP14.38□□□□□ -0.11
PNKP-224ENST00000631020 IGHV3-21A0A0B4J1V1 117 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 C15orf62A8K5M9 175 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 I3L2K1 104 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 IGLL1P15814 213 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 CYCSP99999 105 aaKnown RBP14.37□□□□□ -0.11
PNKP-224ENST00000631020 MLANAQ16655 118 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 ZNF343Q6P1L6 599 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 C8orf86Q6ZUL3 223 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 LINC00482Q8N8I6 264 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 C4orf3Q8WVX3 66 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 SMIM8Q96KF7 97 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 CIB3Q96Q77 187 aaPredicted RBP14.37□□□□□ -0.11
PNKP-224ENST00000631020 OR4C12Q96R67 309 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 GPR61Q9BZJ8 451 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 ARL6Q9H0F7 186 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 THYN1Q9P016 225 aa14.37□□□□□ -0.11
PNKP-224ENST00000631020 NUDT19A8MXV4 375 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 CYB5BO43169 146 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 IGHV3-23P01764 117 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 AP2S1P53680 142 aaPredicted RBP14.36□□□□□ -0.11
PNKP-224ENST00000631020 DEFB136Q30KP8 78 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 ETV3LQ6ZN32 361 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 COMMD7Q86VX2 200 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 SCARB1Q8WTV0 552 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 RAB40CQ96S21 281 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 MFFQ9GZY8 342 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 H3BP45 60 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 MT-CO2P00403 227 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 IGHV3-48P01763 117 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 LGALS1P09382 135 aaKnown RBP14.36□□□□□ -0.11
PNKP-224ENST00000631020 SLC25A4P12235 298 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 S100A10P60903 97 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 RUNX1Q01196 453 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 SPANXN5Q5MJ07 72 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 SLC51BQ86UW2 128 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 PPP1R1CQ8WVI7 109 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 PINX1Q96BK5 328 aaKnown RBP14.36□□□□□ -0.11
PNKP-224ENST00000631020 DUX3Q96PT4 197 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
PNKP-224ENST00000631020 AURKAIP1Q9NWT8 199 aaPredicted RBP14.36□□□□□ -0.11
PNKP-224ENST00000631020 PSENENQ9NZ42 101 aa14.36□□□□□ -0.11
PNKP-224ENST00000631020 RPS10-NUDT3A0A1W2PQS6 291 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 H0YIZ8 118 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 LY86O95711 162 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 TRBV12-3P01733 135 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 PRB2P02812 416 aaPredicted RBP14.35□□□□□ -0.11
PNKP-224ENST00000631020 MYCNOSP40205 109 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 TAS2R30P59541 319 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 OR2F1Q13607 317 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 ZNF345Q14585 488 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 LRRC37A5PQ49AS3 106 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 VN1R17PQ8TDU5 208 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 CCDC140Q96MF4 163 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 MED9Q9NWA0 146 aa14.35□□□□□ -0.11
PNKP-224ENST00000631020 ATP5IP56385 69 aaPredicted RBP14.34□□□□□ -0.11
PNKP-224ENST00000631020 ZNF546Q86UE3 836 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 ZNF502Q8TBZ5 544 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 RAX2Q96IS3 184 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 CXorf58Q96LI9 332 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 MCRIP2Q9BUT9 160 aaKnown RBP14.34□□□□□ -0.11
PNKP-224ENST00000631020 RNF126Q9BV68 326 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 PFDN2Q9UHV9 154 aa14.34□□□□□ -0.11
PNKP-224ENST00000631020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.33□□□□□ -0.12
PNKP-224ENST00000631020 KANTRA0A1W2PQU2 76 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 F8W735 103 aaPredicted RBP14.33□□□□□ -0.12
PNKP-224ENST00000631020 CORTO00230 105 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 DEDDO75618 318 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 THAP6Q8TBB0 222 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 MRAPQ8TCY5 172 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 RNASEH2CQ8TDP1 164 aaKnown RBP14.33□□□□□ -0.12
PNKP-224ENST00000631020 EEF1AKMT3Q96AZ1 226 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 OR5AC2Q9NZP5 309 aa14.33□□□□□ -0.12
PNKP-224ENST00000631020 MRPL36Q9P0J6 103 aaKnown RBP14.33□□□□□ -0.12
PNKP-224ENST00000631020 STRAPQ9Y3F4 350 aaKnown RBP14.33□□□□□ -0.12
PNKP-224ENST00000631020 IGHV4OR15-8A0A075B7B6 117 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 A0A087WW49 117 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 TRBV7-1A0A0A6YYK4 115 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 CFDP00746 253 aaPredicted RBP14.32□□□□□ -0.12
PNKP-224ENST00000631020 IFNA4P05014 189 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 RPP30P78346 268 aaKnown RBP14.32□□□□□ -0.12
PNKP-224ENST00000631020 EGFEM1PQ0D2K5 195 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 CLEC19AQ6UXS0 136 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 OR11H1Q8NG94 326 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 C21orf62Q9NYP8 219 aa14.32□□□□□ -0.12
PNKP-224ENST00000631020 PEF1Q9UBV8 284 aaKnown RBP14.32□□□□□ -0.12
PNKP-224ENST00000631020 PMS2P5A8MQ11 134 aa14.31□□□□□ -0.12
PNKP-224ENST00000631020 PRSS46E5RG02 174 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms