RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 RAB40CQ96S21 281 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 LIME1Q9H400 295 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 RCL1Q9Y2P8 373 aaKnown RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 AMMECR1Q9Y4X0 333 aaPredicted RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CADP27708 2225 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 G3V3Q6 166 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 TOR1AO14656 332 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 RBFOX2O43251 390 aaKnown RBP eCLIP3.67□□□□□ -1.82
VPS29-212ENST00000621131 SSSCA1O60232 199 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 FCGR3BO75015 233 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 ATP6V1G1O75348 118 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 HPRT1P00492 218 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 HRASP01112 189 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 RBP4P02753 201 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 GPR6P46095 362 aaPredicted RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 GNG10P50151 68 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 CAV2P51636 162 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 HBG1P69891 147 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 HBG2P69892 147 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 IFITM2Q01629 132 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 BAXQ07812 192 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 ZNF816Q0VGE8 651 aaPredicted RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 ZNF266Q14584 549 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 Q5BKY6 102 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 PRAMEF5Q5TYX0 476 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 SLC25A24Q6NUK1 477 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 FAM71F2Q6NXP2 309 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 BTNL3Q6UXE8 466 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 HEPN1Q6WQI6 88 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 SPNS3Q6ZMD2 512 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 PDZD9Q8IXQ8 264 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 ZCCHC24Q8N2G6 241 aaKnown RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 OR4D5Q8NGN0 318 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 OR10X1Q8NGY0 326 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 OR4A16Q8NH70 328 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 STOML3Q8TAV4 291 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 TNFRSF14Q92956 283 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 C11orf52Q96A22 123 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 TSNAXQ99598 290 aaKnown RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 TNFRSF19Q9NS68 423 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 SDHAF2Q9NX18 166 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 COA4Q9NYJ1 87 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 RPUSD1Q9UJJ7 312 aaKnown RBP3.67□□□□□ -1.82
VPS29-212ENST00000621131 NUP50Q9UKX7 468 aa3.67□□□□□ -1.82
VPS29-212ENST00000621131 ROS1P08922 2347 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 PLCE1Q9P212 2302 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 DYSFO75923 2080 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 RNF222A6NCQ9 220 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 CEBPZOSA8MTT3 80 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 TXNL1O43396 289 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 SYNGR2O43760 224 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 IFNA5P01569 189 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 GAPDHP04406 335 aaKnown RBP3.66□□□□□ -1.82
VPS29-212ENST00000621131 COX6B1P14854 86 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 NQO2P16083 231 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OMGP23515 440 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 LOXP28300 417 aaPredicted RBP3.66□□□□□ -1.82
VPS29-212ENST00000621131 DUTP33316 252 aaKnown RBP3.66□□□□□ -1.82
VPS29-212ENST00000621131 CEACAM3P40198 252 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 RAB13P51153 203 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 EFNA4P52798 201 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 TMEM33P57088 247 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 TAS2R30P59541 319 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 RAB2AP61019 212 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 GNB2P62879 340 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 TLE4Q04727 773 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 NMSQ5H8A3 153 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OR2B11Q5JQS5 317 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 CLLU1Q5K131 121 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 C11orf71Q6IPW1 123 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 SLC25A48Q6ZT89 311 aaKnown RBP3.66□□□□□ -1.82
VPS29-212ENST00000621131 BAP18Q8IXM2 172 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 Q8N7P7 452 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 C8orf31Q8N9H6 132 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OR1S2Q8NGQ3 325 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OR13D1Q8NGV5 346 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OR9G1Q8NH87 305 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 LHFPL5Q8TAF8 219 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 TMEM186Q96B77 213 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 GPR146Q96CH1 333 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 CCL19Q99731 98 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 IFI27L2Q9H2X8 130 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 LINC00574Q9H8X3 128 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 C19orf12Q9NSK7 152 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 LYRM2Q9NU23 88 aaPredicted RBP3.66□□□□□ -1.82
VPS29-212ENST00000621131 PSENENQ9NZ42 101 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 OR5AC2Q9NZP5 309 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 ONECUT1Q9UBC0 465 aa3.66□□□□□ -1.82
VPS29-212ENST00000621131 PPIAL4CA0A0B4J2A2 164 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 TEX46H3BTG2 121 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 H7C2Y5 167 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 C19orf84I3L1E1 186 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 M0R1W7 72 aa3.65□□□□□ -1.83
VPS29-212ENST00000621131 ENSAO43768 121 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms