RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 PYY3Q5JQD4 70 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 HAPLN4Q86UW8 402 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 RBMY1FQ15415 496 aaKnown RBP12.12□□□□□ -0.47
PTPN9-206ENST00000618819 LAIR2Q6ISS4 152 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 FAM57AQ8TBR7 257 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 C3orf79P0CE67 100 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 FAM216BQ8N7L0 139 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 H3BMM0 161 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 IMMP1LQ96LU5 166 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF138P52744 262 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 LINC01590Q5TEZ4 76 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 LEPROTO15243 131 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 CD24P25063 80 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 TCF15Q12870 199 aa12.11□□□□□ -0.47
PTPN9-206ENST00000618819 ICE1Q9Y2F5 2266 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 HEATR5BQ9P2D3 2071 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 EFNB3Q15768 340 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 IFITM1P13164 125 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 FAM231BA6NCW3 169 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 PLEKHB2Q96CS7 222 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
PTPN9-206ENST00000618819 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 AHRRA9YTQ3 701 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 ZNF501Q96CX3 271 aaPredicted RBP12.09□□□□□ -0.47
PTPN9-206ENST00000618819 DDX60LQ5H9U9 1706 aaKnown RBP12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TFF1P04155 84 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 SPTBP11277 2137 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TRAV12-1A0A0B4J245 112 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 FOXH1O75593 365 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TMEM30BQ3MIR4 351 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 CDCP2Q5VXM1 449 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TRPM6Q9BX84 2022 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TEX43Q6ZNM6 134 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 TM2D1Q9BX74 207 aa12.09□□□□□ -0.47
PTPN9-206ENST00000618819 SAA2-SAA4A0A096LPE2 208 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 EFEMP2O95967 443 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SAA2P0DJI9 122 aaPredicted RBP12.08□□□□□ -0.48
PTPN9-206ENST00000618819 MAST2Q6P0Q8 1798 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SYS1-DBNDD2H3BUS1 97 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SPXQ9BT56 116 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
PTPN9-206ENST00000618819 TCRBV4S1A1TA0A5B7 111 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 BTCP35070 178 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 PCOLCEQ15113 449 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 PIKFYVEQ9Y2I7 2098 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 F2Z2F3 143 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.48
PTPN9-206ENST00000618819 RGPD1P0DJD0 1748 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 LTBRP36941 435 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 H0YIZ8 118 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 PRB2P02812 416 aaPredicted RBP12.07□□□□□ -0.48
PTPN9-206ENST00000618819 STPG4Q8N801 248 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 CKAP5Q14008 2032 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 A0A0G2JK05 382 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 RS1O15537 224 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 LILRA6Q6PI73 481 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 LAMB1P07942 1786 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 CD5LO43866 347 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 LY6G6FQ5SQ64 297 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 TMEM158Q8WZ71 300 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 GAGE1Q13065 139 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 TCTEX1D4Q5JR98 221 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 F8VVB4 439 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 F8VWA3 439 aa12.07□□□□□ -0.48
PTPN9-206ENST00000618819 IGHMP01871 453 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms