RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 LOC102723971A0A1B0GUV8 181 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 NPBWR1P48145 328 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 CD69Q07108 199 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 GAMTQ14353 236 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 TNXAQ16473 311 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 RAB24Q969Q5 203 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 SSX3Q99909 188 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 MEGF9Q9H1U4 602 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 GNG13Q9P2W3 67 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 PXMP4Q9Y6I8 212 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 REG1AP05451 166 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 SRP19P09132 144 aaKnown RBP16.26■□□□□ 0.19
SDHA-220ENST00000617470 BRS3P32247 399 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 MAS1LP35410 378 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 ACOT6Q3I5F7 207 aaPredicted RBP16.26■□□□□ 0.19
SDHA-220ENST00000617470 SSMEM1Q8WWF3 244 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 ZNF48Q96MX3 618 aaPredicted RBP16.26■□□□□ 0.19
SDHA-220ENST00000617470 MXRA5Q9NR99 2828 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 SEC14L6B5MCN3 397 aa16.25■□□□□ 0.19
SDHA-220ENST00000617470 RPL27AP46776 148 aaKnown RBP16.25■□□□□ 0.19
SDHA-220ENST00000617470 SIGLECL1Q8N7X8 197 aa16.25■□□□□ 0.19
SDHA-220ENST00000617470 RXFP4Q8TDU9 374 aa16.25■□□□□ 0.19
SDHA-220ENST00000617470 ACTR3CQ9C0K3 210 aaPredicted RBP16.25■□□□□ 0.19
SDHA-220ENST00000617470 ZFHX3Q15911 3703 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 DNASE2O00115 360 aaPredicted RBP16.24■□□□□ 0.19
SDHA-220ENST00000617470 AREGP15514 252 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 HES1Q14469 280 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 RBMS3Q6XE24 437 aaKnown RBP16.24■□□□□ 0.19
SDHA-220ENST00000617470 TMEM144Q7Z5S9 345 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 EAF1Q96JC9 268 aaPredicted RBP16.24■□□□□ 0.19
SDHA-220ENST00000617470 TMPRSS5Q9H3S3 457 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 FNDC4Q9H6D8 234 aaPredicted RBP16.24■□□□□ 0.19
SDHA-220ENST00000617470 TNFRSF19Q9NS68 423 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 FAM74A7A6NL05 159 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 TEX22C9J3V5 150 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 CRLF1O75462 422 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 MFAP2P55001 183 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 FAM74A3Q4VXF1 159 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 KHDC3LQ587J8 217 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 PVRIGQ6DKI7 326 aa16.24■□□□□ 0.19
SDHA-220ENST00000617470 NSD1Q96L73 2696 aaPredicted RBP16.23■□□□□ 0.19
SDHA-220ENST00000617470 ZFP92A6NM28 416 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 H3BUX3 64 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 CYB5BO43169 146 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 SOX15O60248 233 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 MOSP00540 346 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 HSPB1P04792 205 aaKnown RBP16.23■□□□□ 0.19
SDHA-220ENST00000617470 LINC00869P0C866 280 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 BCL2P10415 239 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 GPX4P36969 197 aaPredicted RBP16.23■□□□□ 0.19
SDHA-220ENST00000617470 GNB1P62873 340 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PRR20EP86478 221 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PRR20CP86479 221 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PRR20DP86480 221 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PRR20BP86481 221 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PRR20AP86496 221 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 PMS2P11Q13670 270 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 C19orf35Q6ZS72 473 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 NPBQ8NG41 125 aa16.23■□□□□ 0.19
SDHA-220ENST00000617470 ACTL6BO94805 426 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 NDUFA3O95167 84 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 SNRNP70P08621 437 aaKnown RBP16.22■□□□□ 0.19
SDHA-220ENST00000617470 RPL29P47914 159 aaKnown RBP16.22■□□□□ 0.19
SDHA-220ENST00000617470 MMDQ15546 238 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 SLC16A13Q7RTY0 426 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 STPG3Q8N7X2 389 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 OR2T6Q8NHC8 308 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 RNASEH2CQ8TDP1 164 aaKnown RBP16.22■□□□□ 0.19
SDHA-220ENST00000617470 CACNG8Q8WXS5 425 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 SLC45A2Q9UMX9 530 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 TEP1Q99973 2627 aaKnown RBP16.22■□□□□ 0.19
SDHA-220ENST00000617470 NBR2O15453 112 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 SNAPINO95295 136 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 APELAP0DMC3 54 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 CDC34P49427 236 aaPredicted RBP16.22■□□□□ 0.19
SDHA-220ENST00000617470 B2MP61769 119 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 LY6EQ16553 131 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 Q6YL49 198 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 ZNF114Q8NC26 417 aa16.22■□□□□ 0.19
SDHA-220ENST00000617470 FN1P02751 2386 aaKnown RBP16.21■□□□□ 0.19
SDHA-220ENST00000617470 LOC105371267A0A1B0GV96 52 aa16.21■□□□□ 0.19
SDHA-220ENST00000617470 NUPL2O15504 423 aaKnown RBP16.21■□□□□ 0.19
SDHA-220ENST00000617470 IGHV4-59P01825 116 aa16.21■□□□□ 0.19
SDHA-220ENST00000617470 Q8N6K4 173 aa16.21■□□□□ 0.19
SDHA-220ENST00000617470 CLRN3Q8NCR9 226 aa16.21■□□□□ 0.19
SDHA-220ENST00000617470 HOXA3O43365 443 aaPredicted RBP16.2■□□□□ 0.18
SDHA-220ENST00000617470 FAM106CPP0CH98 169 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 SUB1P53999 127 aaKnown RBP eCLIP16.2■□□□□ 0.182e-10■■■■□ 23.4
SDHA-220ENST00000617470 CYB561D1Q8N8Q1 229 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 SRSF12Q8WXF0 261 aaKnown RBP16.2■□□□□ 0.18
SDHA-220ENST00000617470 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
SDHA-220ENST00000617470 IER3P46695 156 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 RAB31Q13636 194 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 EBI3Q14213 229 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 GATAD1Q8WUU5 269 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 KCNIP2Q9NS61 270 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 DMRT1Q9Y5R6 373 aa16.2■□□□□ 0.18
SDHA-220ENST00000617470 IGHV3-48P01763 117 aa16.19■□□□□ 0.18
SDHA-220ENST00000617470 TMEM11P17152 192 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms