RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 TTTY12Q9BZ98 90 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 CXXC4Q9H2H0 198 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 KLF13Q9Y2Y9 288 aaPredicted RBP13.48□□□□□ -0.25
TSKU-205ENST00000612930 CELSR3Q9NYQ7 3312 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 TMEM265A0A087WTH1 108 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 HIST1H1EP10412 219 aaKnown RBP13.48□□□□□ -0.25
TSKU-205ENST00000612930 GPR183P32249 361 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 HBBP68871 147 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 C2orf91Q6ZV80 131 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 CHTOPQ9Y3Y2 248 aaKnown RBP13.48□□□□□ -0.25
TSKU-205ENST00000612930 TNCP24821 2201 aa13.48□□□□□ -0.25
TSKU-205ENST00000612930 C7orf71A4D174 169 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 PRDX2P32119 198 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 SMIM21Q3B7S5 101 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 FER1L6-AS1Q8NA97 138 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 CHRDL1Q9BU40 450 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
TSKU-205ENST00000612930 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 B4GALT7Q9UBV7 327 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.47□□□□□ -0.25
TSKU-205ENST00000612930 NBEAP1P0C6P0 100 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 TMEM11P17152 192 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 GNG5P63218 68 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 UFSP1Q6NVU6 142 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 PMCHL2Q9BQD1 86 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 RAB30Q15771 203 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 PET117Q6UWS5 81 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 SPOCK3Q9BQ16 436 aa13.47□□□□□ -0.25
TSKU-205ENST00000612930 FAM231BA6NCW3 169 aa13.46□□□□□ -0.25
TSKU-205ENST00000612930 SP9P0CG40 484 aa13.46□□□□□ -0.25
TSKU-205ENST00000612930 H1FXQ92522 213 aaKnown RBP13.46□□□□□ -0.25
TSKU-205ENST00000612930 SGK494Q96LW2 274 aa13.46□□□□□ -0.25
TSKU-205ENST00000612930 RPH3ALQ9UNE2 315 aa13.46□□□□□ -0.25
TSKU-205ENST00000612930 GAGE10A6NGK3 116 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 H0Y8G0 127 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 F2RL2O00254 374 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 ZNF138P52744 262 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 PRCDQ00LT1 54 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.26
TSKU-205ENST00000612930 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 GTSF1Q8WW33 167 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 MAP1LC3CQ9BXW4 147 aa13.46□□□□□ -0.26
TSKU-205ENST00000612930 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
TSKU-205ENST00000612930 CLEC2AQ6UVW9 174 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 WFDC8Q8IUA0 241 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 SELENOKQ9Y6D0 94 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 PPIAL4DF5H284 164 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 SNAI2O43623 268 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 LIPFP07098 398 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 CR1LQ2VPA4 569 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 CT45A1Q5HYN5 189 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 RNFT1Q5M7Z0 435 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 CT45A3Q8NHU0 189 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 LRRC29Q8WV35 223 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 PAXXQ9BUH6 204 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
TSKU-205ENST00000612930 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
TSKU-205ENST00000612930 IGKV1D-17A0A075B6S4 117 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 G3V4G9 280 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 NTN3O00634 580 aaPredicted RBP13.44□□□□□ -0.26
TSKU-205ENST00000612930 COX8AP10176 69 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 SSBP2P81877 361 aaPredicted RBP13.44□□□□□ -0.26
TSKU-205ENST00000612930 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 RNASE2P10153 161 aaKnown RBP13.44□□□□□ -0.26
TSKU-205ENST00000612930 ARF6P62330 175 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 CD69Q07108 199 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 JMJD8Q96S16 334 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 PRNDQ9UKY0 176 aa13.44□□□□□ -0.26
TSKU-205ENST00000612930 ZNF137PP52743 207 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 PAX2Q02962 417 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 POU2AF1Q16633 256 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 LINC01545Q5VT33 79 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 CT55Q8WUE5 264 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 PGLYRP4Q96LB8 373 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 TEX50A0A1B0GTY4 177 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 UPK2O00526 184 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 CIDEAO60543 219 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 TMEM97Q5BJF2 176 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 FXYD5Q96DB9 178 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 RPP21Q9H633 154 aaKnown RBP13.43□□□□□ -0.26
TSKU-205ENST00000612930 ZNF257Q9Y2Q1 563 aa13.43□□□□□ -0.26
TSKU-205ENST00000612930 IGHV1-2P23083 117 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 HTR1DP28221 377 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 MYCNOSP40205 109 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 LINC00696Q6ZRV3 163 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 SRRM4A7MD48 611 aaKnown RBP13.42□□□□□ -0.26
TSKU-205ENST00000612930 LYZL6O75951 148 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 BPIFA4PQ86YQ2 179 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 OR10W1Q8NGF6 305 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 ZNF714Q96N38 554 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 MLST8Q9BVC4 326 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
TSKU-205ENST00000612930 K7ESF4 209 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms