RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 RNASE2P10153 161 aaKnown RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 DHODHQ02127 395 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 RTBDNQ9BSG5 229 aaPredicted RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 TMEM50AO95807 157 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 TNFSF8P32971 234 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 OPRK1P41145 380 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 TFPI2P48307 235 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 SPCS3P61009 180 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 PRRT1Q99946 306 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
PRKN-208ENST00000610470 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 OR4C16Q8NGL9 310 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 RNF183Q96D59 192 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 A0A0J9YWU9 116 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 CLN5O75503 358 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 HTR2BP41595 481 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 Q6ZRM9 215 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
PRKN-208ENST00000610470 GBGT1Q8N5D6 347 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 OR4X1Q8NH49 305 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 ST8SIA2Q92186 375 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 HYDINQ4G0P3 5121 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 ALMS1Q8TCU4 4167 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 RPS10-NUDT3A0A1W2PQS6 291 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
PRKN-208ENST00000610470 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 FNDC4Q9H6D8 234 aaPredicted RBP12.82□□□□□ -0.36
PRKN-208ENST00000610470 CACNG5Q9UF02 275 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 TRAV30A0A087WSZ9 112 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 A0A1B0GU03 582 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 A0A1W2PS18 150 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 NPPCP23582 126 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 TMEM217Q8N7C4 229 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 GPR146Q96CH1 333 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 METTL26Q96S19 204 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 MS4A6AQ9H2W1 248 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 HEYLQ9NQ87 328 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 IGHV3-66A0A0C4DH42 116 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MPTX1A8MV57 137 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 DFFBO76075 338 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 ZNF124Q15973 351 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MLANAQ16655 118 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 TMEM230Q96A57 120 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 SOSTQ9BQB4 213 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 CEBPZOSA8MTT3 80 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 S100A5P33763 92 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 LILRB2Q8N423 598 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 SLC24A4Q8NFF2 622 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
PRKN-208ENST00000610470 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms