RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 K7EMT4 169 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 PITX3O75364 302 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 TMEM50AO95807 157 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 SLC25A6P12236 298 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 MLANAQ16655 118 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 C11orf87Q6NUJ2 197 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 OR1S1Q8NH92 325 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 S100ZQ8WXG8 99 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 CCDC32Q9BV29 185 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 RBKSQ9H477 322 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 SELENOKQ9Y6D0 94 aa12.61□□□□□ -0.39
SSBP4-213ENST00000602088 C15orf62A8K5M9 175 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 LYRM1O43325 122 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 OR4E1P0C645 316 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-213ENST00000602088 OPRK1P41145 380 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 BTNL8Q6UX41 500 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 TMEM61Q8N0U2 210 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 RNASEH2CQ8TDP1 164 aaKnown RBP12.6□□□□□ -0.39
SSBP4-213ENST00000602088 DTD1Q8TEA8 209 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 WDR89Q96FK6 387 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-213ENST00000602088 C20orf24Q9BUV8 137 aa12.6□□□□□ -0.39
SSBP4-213ENST00000602088 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
SSBP4-213ENST00000602088 IGHV3OR16-8A0A075B7F1 116 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 A8MZ25 164 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 HOXB5P09067 269 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 ANXA7P20073 488 aaKnown RBP12.59□□□□□ -0.39
SSBP4-213ENST00000602088 DHRS2Q13268 280 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 OR4X1Q8NH49 305 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 OR10C1Q96KK4 312 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 PTTG2Q9NZH5 202 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 U3KQ87 197 aa12.59□□□□□ -0.39
SSBP4-213ENST00000602088 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 RPS10-NUDT3A0A1W2PQS6 291 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 CLN5O75503 358 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 YIF1AO95070 293 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 IFNA10P01566 189 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 NPY1RP25929 384 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 GGNBP1Q5YKI7 109 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 ASCL2Q99929 193 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 BATF3Q9NR55 127 aa12.58□□□□□ -0.4
SSBP4-213ENST00000602088 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 ZNF207O43670 478 aaKnown RBP12.57□□□□□ -0.4
SSBP4-213ENST00000602088 ATP5IP56385 69 aaPredicted RBP12.57□□□□□ -0.4
SSBP4-213ENST00000602088 CD81P60033 236 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 C4orf46Q504U0 113 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 COQ8AQ8NI60 647 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 NEURL2Q9BR09 285 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
SSBP4-213ENST00000602088 ADAP1O75689 374 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
SSBP4-213ENST00000602088 TCRBP04435 133 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 CD7P09564 240 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 SLC25A4P12235 298 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 ETFRF1Q6IPR1 90 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
SSBP4-213ENST00000602088 TMEM116Q8NCL8 245 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 C20orf85Q9H1P6 137 aa12.56□□□□□ -0.4
SSBP4-213ENST00000602088 TRAV30A0A087WSZ9 112 aa12.55□□□□□ -0.4
SSBP4-213ENST00000602088 TRAV14DV4A0A0A6YYC5 116 aa12.55□□□□□ -0.4
SSBP4-213ENST00000602088 IGHV7-4-1A0A0J9YVY3 117 aa12.55□□□□□ -0.4
SSBP4-213ENST00000602088 IGKV1-17P01599 117 aa12.55□□□□□ -0.4
SSBP4-213ENST00000602088 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
SSBP4-213ENST00000602088 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSBP4-213ENST00000602088 STAB2Q8WWQ8 2551 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 SYNGR2O43760 224 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 SCGB2A1O75556 95 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 MED6O75586 246 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 RND2P52198 227 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 ZNF846Q147U1 533 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 LAMTOR1Q6IAA8 161 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 MITD1Q8WV92 249 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 RHPN1-AS1Q9BWJ2 59 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 WDR12Q9GZL7 423 aaKnown RBP12.54□□□□□ -0.4
SSBP4-213ENST00000602088 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
SSBP4-213ENST00000602088 NBEAL2Q6ZNJ1 2754 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 CHEK1O14757 476 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 TSPAN4O14817 238 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 IFNA21P01568 189 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 IFNA4P05014 189 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 IAPPP10997 89 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 TIGITQ495A1 244 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
SSBP4-213ENST00000602088 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1006.3 ms