RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 CBX5P45973 191 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 P2RY1P47900 373 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 EMP1P54849 157 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 CMC4P56277 68 aaPredicted RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 FXYD7P58549 80 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 LSM3P62310 102 aaKnown RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 NEDD8Q15843 81 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 TIGITQ495A1 244 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 RNASE12Q5GAN4 147 aaKnown RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 PSMG4Q5JS54 123 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 PVRIGQ6DKI7 326 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 ZNF600Q6ZNG1 722 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 CMTM1Q8IZ96 169 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 Q8N1X5 172 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 SAMD12Q8N8I0 201 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 ZNF114Q8NC26 417 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 CSNK1G2-AS1Q8NCQ2 148 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 OR6F1Q8NGZ6 308 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 TXN2Q99757 166 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 HRH4Q9H3N8 390 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 FNDC4Q9H6D8 234 aaPredicted RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 FKBP11Q9NYL4 201 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 XCL2Q9UBD3 114 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 TBC1D24Q9ULP9 559 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 ANAPC10Q9UM13 185 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 A0A0A6YYH2 397 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 A0A0B4J293 547 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 A0A0G2JRQ6 117 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 A6NJ64 397 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 M0QYG6 137 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 IGKV3-20P01619 116 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 RNASE2P10153 161 aaKnown RBP6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 MIFP14174 115 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 NPPCP23582 126 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 ETV6P41212 452 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 TCTAP57738 103 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 HSPE1P61604 102 aaKnown RBP6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 ERHP84090 104 aaKnown RBP6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 TMEM69Q5SWH9 247 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 SNX29P2Q8IUI4 249 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 POM121L12Q8N7R1 296 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 DUSP18Q8NEJ0 188 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 TSC22D3Q99576 134 aa6.2□□□□□ -1.42
SHKBP1-220ENST00000599716 IGHV3OR16-12A0A075B7B8 117 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 IFNA17P01571 189 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 AMBPP02760 352 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 NAT1P18440 290 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 RPS19P39019 145 aaKnown RBP6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 OPRK1P41145 380 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 NPBWR1P48145 328 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 TSPAN5P62079 268 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 DHRS2Q13268 280 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 SP6Q3SY56 376 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 UBE2NLQ5JXB2 153 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 SLC35G3Q8N808 338 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 BORCS5Q969J3 196 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 TMEM230Q96A57 120 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 S100A16Q96FQ6 103 aaKnown RBP6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 RAB40CQ96S21 281 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 TP53RKQ96S44 253 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 RNF126Q9BV68 326 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 RAB26Q9ULW5 256 aa6.19□□□□□ -1.42
SHKBP1-220ENST00000599716 NACAE9PAV3 2078 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 IGKV1-17P01599 117 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 SPP1P10451 314 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 PGAM2P15259 253 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 HTN3P15516 51 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 CRYBB3P26998 211 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 PRSS3P35030 304 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 SNCAP37840 140 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 HOXA1P49639 335 aaPredicted RBP6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 SCAND1P57086 179 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 TAS2R46P59540 309 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 MORN3Q6PF18 240 aaPredicted RBP6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 FCGR1BQ92637 280 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 METTL26Q96S19 204 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 VCX3BQ9H321 246 aa6.18□□□□□ -1.42
SHKBP1-220ENST00000599716 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 HELTA6NFD8 242 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 CLN5O75503 358 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 NXPH3O95157 252 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 P0C879 139 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 P0DMU3 169 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 FAM231AP0DMU4 169 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 FAM231CP0DMU5 169 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 AKR1C2P52895 323 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 USF2Q15853 346 aaPredicted RBP6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 Q6ZRM9 215 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 UBE2DNLQ8IWF7 75 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 CADM3Q8N126 398 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 CENPSQ8N2Z9 138 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 GPX8Q8TED1 209 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 GLMPQ8WWB7 406 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 GRAMD2BQ96HH9 432 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 NDUFAF3Q9BU61 184 aa6.17□□□□□ -1.42
SHKBP1-220ENST00000599716 TMEM231Q9H6L2 316 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms