RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PET100P0DJ07 73 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 FOLR2P14207 255 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 ERVK-16P61578 105 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 CLLU1Q5K131 121 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 ACOT7LQ6ZUV0 252 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 SLC51BQ86UW2 128 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 SLC7A5P1Q8MH63 180 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 LGI3Q8N145 548 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 DYNLRB2Q8TF09 96 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 GLYATL2Q8WU03 294 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 OR10C1Q96KK4 312 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
SCAF1-203ENST00000598359 ARL6Q9H0F7 186 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 PRR13Q9NZ81 148 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 MBD2Q9UBB5 411 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 ZNF785A8K8V0 405 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 H0YIZ8 118 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 BCL2L11O43521 198 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 CFDP00746 253 aaPredicted RBP10.39□□□□□ -0.75
SCAF1-203ENST00000598359 IFNA21P01568 189 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 CLEC3BP05452 202 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 OR13C7P0DN81 318 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 HIST1H1BP16401 226 aaKnown RBP10.39□□□□□ -0.75
SCAF1-203ENST00000598359 GPR183P32249 361 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 WT1-ASQ06250 92 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 GTSCR1Q86UQ5 136 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 CMTM1Q8IZ96 169 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM56Q96MV1 263 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM222Q9H0R3 208 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 PLEKHA3Q9HB20 300 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM56-RWDD3S4R434 201 aa10.39□□□□□ -0.75
SCAF1-203ENST00000598359 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 HOXB5P09067 269 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 CD7P09564 240 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 UCP1P25874 307 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 MFAP2P55001 183 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 CD81P60033 236 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 GUCA2BQ16661 112 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 UNQ9165/PRO28630Q6UXU0 137 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 TBC1D26Q86UD7 250 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 ZNF502Q8TBZ5 544 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 IL22RA2Q969J5 263 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 TUBA4BQ9H853 241 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 OR51B2Q9Y5P1 312 aa10.38□□□□□ -0.75
SCAF1-203ENST00000598359 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 A8MZ25 164 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 LGALS9O00182 355 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 CBLN1P23435 193 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 RAB32Q13637 225 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 HAGHQ16775 308 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
SCAF1-203ENST00000598359 LRRC37A5PQ49AS3 106 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 TM4SF20Q53R12 229 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 CXorf58Q96LI9 332 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 NDUFA4L2Q9NRX3 87 aa10.37□□□□□ -0.75
SCAF1-203ENST00000598359 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 KANTRA0A1W2PQU2 76 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 CDS2O95674 445 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 SERPINE2P07093 398 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 S100GP29377 79 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 SP6Q3SY56 376 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 FAM106AQ4KMX7 169 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
SCAF1-203ENST00000598359 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 PHYHIPLQ96FC7 376 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
SCAF1-203ENST00000598359 RETNQ9HD89 108 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 MLXQ9UH92 298 aa10.36□□□□□ -0.75
SCAF1-203ENST00000598359 OR2T8A6NH00 312 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 FGF2P09038 288 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 AP2S1P53680 142 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms