RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PXDC1Q5TGL8 231 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 ACSM6Q6P461 480 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 Q6ZRG5 221 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 TMEM116Q8NCL8 245 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 OR5T1Q8NG75 326 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 VSIRQ9H7M9 311 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 TMEM160Q9NX00 188 aa16.33■□□□□ 0.21
PNKP-203ENST00000593946 G3V318 75 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 K7EIM0 57 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 IGF1P05019 195 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 HNF1AP20823 631 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 RND2P52198 227 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 ELLP55199 621 aaPredicted RBP16.33■□□□□ 0.2
PNKP-203ENST00000593946 KLK9Q2XQG4 91 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 DPPA3Q6W0C5 159 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 SIGLECL1Q8N7X8 197 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 FAM213BQ8TBF2 198 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 NPIPB3Q92617 1050 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 RPRMQ9NS64 109 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 MED9Q9NWA0 146 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 KLK9Q9UKQ9 250 aa16.33■□□□□ 0.2
PNKP-203ENST00000593946 CYB5BO43169 146 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 SOX15O60248 233 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 TMEM41BQ5BJD5 291 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 FFAR4Q5NUL3 377 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 SLC35E3Q7Z769 313 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 THAP8Q8NA92 274 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 KCNIP2Q9NS61 270 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 TNFRSF19Q9NS68 423 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 MTORP42345 2549 aa16.32■□□□□ 0.2
PNKP-203ENST00000593946 IGHV3-21A0A0B4J1V1 117 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
PNKP-203ENST00000593946 Q6ZS46 218 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 SMR3AQ99954 134 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 SLC45A2Q9UMX9 530 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 PXMP4Q9Y6I8 212 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 TRAV41A0A0B4J266 112 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 ZNF616Q08AN1 781 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 MIC13Q5XKP0 118 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 LYPD6BQ8NI32 183 aa16.31■□□□□ 0.2
PNKP-203ENST00000593946 HIVEP2P31629 2446 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 MBP02144 154 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 OR10J1P30954 320 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 RAB2AP61019 212 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 PRR20EP86478 221 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 PRR20CP86479 221 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 PRR20DP86480 221 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 PRR20BP86481 221 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 PRR20AP86496 221 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 THYN1Q9P016 225 aa16.3■□□□□ 0.2
PNKP-203ENST00000593946 TSPAN15O95858 294 aa16.29■□□□□ 0.2
PNKP-203ENST00000593946 HIST1H1BP16401 226 aaKnown RBP16.29■□□□□ 0.2
PNKP-203ENST00000593946 COMMD7Q86VX2 200 aa16.29■□□□□ 0.2
PNKP-203ENST00000593946 STPG3Q8N7X2 389 aa16.29■□□□□ 0.2
PNKP-203ENST00000593946 OR4X1Q8NH49 305 aa16.29■□□□□ 0.2
PNKP-203ENST00000593946 PFDN2Q9UHV9 154 aa16.29■□□□□ 0.2
PNKP-203ENST00000593946 TEX46H3BTG2 121 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 YIF1AO95070 293 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 LINC00869P0C866 280 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 M6PRP20645 277 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 B2MP61769 119 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 RPP25LQ8N5L8 163 aaKnown RBP16.28■□□□□ 0.2
PNKP-203ENST00000593946 TMEM86BQ8N661 226 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 HRH4Q9H3N8 390 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 LINC00527Q9UJ94 153 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 ZNF580Q9UK33 172 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 TRBV9A0A0B4J1U6 114 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 TCRBV4S1A1TA0A5B7 111 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 AP4M1O00189 453 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 LY6G6DO95868 133 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 ACOT6Q3I5F7 207 aaPredicted RBP16.28■□□□□ 0.2
PNKP-203ENST00000593946 RCC1LQ96I51 464 aaKnown RBP16.28■□□□□ 0.2
PNKP-203ENST00000593946 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
PNKP-203ENST00000593946 HIVEP1P15822 2718 aa16.27■□□□□ 0.2
PNKP-203ENST00000593946 ZFP92A6NM28 416 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 OR2J3O76001 311 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 NDUFB8O95169 186 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 ZNF726P1Q15940 193 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 CYP2G1PQ6ZSU1 146 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 BPIFCQ8NFQ6 507 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 OR10G4Q8NGN3 311 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 OR10G9Q8NGN4 311 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 OR10G7Q8NGN6 311 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 TRGV9Q99603 122 aa16.27■□□□□ 0.19
PNKP-203ENST00000593946 MFSD2BA6NFX1 497 aa16.26■□□□□ 0.19
PNKP-203ENST00000593946 H2AFB1P0C5Y9 115 aa16.26■□□□□ 0.19
PNKP-203ENST00000593946 GCSAMLQ5JQS6 135 aa16.26■□□□□ 0.19
PNKP-203ENST00000593946 NOL4LQ96MY1 436 aaPredicted RBP16.26■□□□□ 0.19
PNKP-203ENST00000593946 FBXL7Q9UJT9 491 aa16.26■□□□□ 0.19
PNKP-203ENST00000593946 GATA2P23769 480 aaPredicted RBP16.25■□□□□ 0.19
PNKP-203ENST00000593946 PPIFP30405 207 aaKnown RBP16.25■□□□□ 0.19
PNKP-203ENST00000593946 ZNF90Q03938 601 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 SSX7Q7RTT5 188 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 CLN5O75503 358 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 IGLC1P0CG04 106 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 SELENOTP62341 195 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 RHOGP84095 191 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 SCGB2A2Q13296 93 aa16.25■□□□□ 0.19
PNKP-203ENST00000593946 SPSB3Q6PJ21 355 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms