RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SURF2Q15527 256 aaPredicted RBP11.97□□□□□ -0.49
MBD3-206ENST00000589901 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
MBD3-206ENST00000589901 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
MBD3-206ENST00000589901 RPP25LQ8N5L8 163 aaKnown RBP11.97□□□□□ -0.49
MBD3-206ENST00000589901 TMEM217Q8N7C4 229 aa11.97□□□□□ -0.49
MBD3-206ENST00000589901 ZNF114Q8NC26 417 aa11.97□□□□□ -0.49
MBD3-206ENST00000589901 PHLDA1Q8WV24 401 aaPredicted RBP11.97□□□□□ -0.49
MBD3-206ENST00000589901 SLIRPQ9GZT3 109 aaKnown RBP11.97□□□□□ -0.49
MBD3-206ENST00000589901 MPTX1A8MV57 137 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 GNG7O60262 68 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 ERHP84090 104 aaKnown RBP11.96□□□□□ -0.49
MBD3-206ENST00000589901 OR4D10Q8NGI6 311 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 OR13C8Q8NGS7 320 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 ENY2Q9NPA8 101 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 MCUBQ9NWR8 336 aa11.96□□□□□ -0.49
MBD3-206ENST00000589901 PIGBOS1A0A0B4J2F0 54 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 GSTZ1O43708 216 aaPredicted RBP11.95□□□□□ -0.5
MBD3-206ENST00000589901 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
MBD3-206ENST00000589901 TNFSF8P32971 234 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 PYDC2Q56P42 97 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 TOMM20LQ6UXN7 152 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 TCF24Q7RTU0 167 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 RARRES2Q99969 163 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 DNAH10Q8IVF4 4471 aa11.95□□□□□ -0.5
MBD3-206ENST00000589901 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 ZNF701M0R085 212 aaPredicted RBP11.94□□□□□ -0.5
MBD3-206ENST00000589901 DEDDO75618 318 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 IFNA17P01571 189 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 SNCAP37840 140 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
MBD3-206ENST00000589901 SLC35G3Q8N808 338 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 OR4C16Q8NGL9 310 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
MBD3-206ENST00000589901 DFFBO76075 338 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 INPP1P49441 399 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.5
MBD3-206ENST00000589901 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
MBD3-206ENST00000589901 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 DHODHQ02127 395 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 SPANXN2Q5MJ10 180 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 FAAP20Q6NZ36 180 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 FAM219AQ8IW50 185 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 TOMM5Q8N4H5 51 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 OR11H2Q8NH07 326 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 TP53RKQ96S44 253 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 GINS3Q9BRX5 216 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 MS4A6AQ9H2W1 248 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
MBD3-206ENST00000589901 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
MBD3-206ENST00000589901 A0A0B4J293 547 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 ANKRD20A5PA0PJZ0 165 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 DEFB4AO15263 64 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 ST8SIA3O43173 380 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 SCGB2A1O75556 95 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 CA1P00915 261 aaPredicted RBP11.92□□□□□ -0.5
MBD3-206ENST00000589901 ANXA3P12429 323 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 NPBWR1P48145 328 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 SP6Q3SY56 376 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
MBD3-206ENST00000589901 VPS13DQ5THJ4 4388 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 A0A1B0GU03 582 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
MBD3-206ENST00000589901 P0C879 139 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 UCP1P25874 307 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 HOXA1P49639 335 aaPredicted RBP11.91□□□□□ -0.5
MBD3-206ENST00000589901 DEFB131AP59861 70 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
MBD3-206ENST00000589901 LGALS9CQ6DKI2 356 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 ZNF600Q6ZNG1 722 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 C11orf45Q8TAV5 145 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
MBD3-206ENST00000589901 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
MBD3-206ENST00000589901 CORTO00230 105 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 TMEM50AO95807 157 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 CD5P06127 495 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 OR5AC1P0C628 307 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 PVRIGQ6DKI7 326 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 DEDD2Q8WXF8 326 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 RBPMSQ93062 196 aaKnown RBP11.9□□□□□ -0.5
MBD3-206ENST00000589901 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.5
MBD3-206ENST00000589901 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
MBD3-206ENST00000589901 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
MBD3-206ENST00000589901 RNASE2P10153 161 aaKnown RBP11.89□□□□□ -0.51
MBD3-206ENST00000589901 ETV6P41212 452 aa11.89□□□□□ -0.51
MBD3-206ENST00000589901 SRPXP78539 464 aa11.89□□□□□ -0.51
MBD3-206ENST00000589901 TMEM187Q14656 261 aa11.89□□□□□ -0.51
MBD3-206ENST00000589901 RBMS2Q15434 407 aaKnown RBP11.89□□□□□ -0.51
MBD3-206ENST00000589901 MLANAQ16655 118 aa11.89□□□□□ -0.51
MBD3-206ENST00000589901 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms