RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 C19orf24Q9BVV8 132 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 GGTLC1Q9BX51 225 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 PRSS22Q9GZN4 317 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 WNT10AQ9GZT5 417 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 HRH4Q9H3N8 390 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 SLC39A9Q9NUM3 307 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 MED9Q9NWA0 146 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 FLNCQ14315 2725 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 NAV3Q8IVL0 2385 aa4.9□□□□□ -1.62
LIG3-206ENST00000586058 MDFIC2A0A1B0GVS7 189 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 TCRBV4S1A1TA0A5B7 111 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 RAB19A4D1S5 217 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 MAP1LC3B2A6NCE7 125 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CGB1A6NKQ9 187 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 FAM223BA6NKX1 122 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 PRSS46E5RG02 174 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 H3BUA1 57 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 FCN1O00602 326 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 FSHBP01225 129 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 IGHV4-59P01825 116 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CRYBA1P05813 215 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CRYGCP07315 174 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CD33P20138 364 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 OR10J1P30954 320 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.63
LIG3-206ENST00000586058 MFAP4P55083 255 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 GAMTQ14353 236 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 AKIRIN2Q53H80 203 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 KHDC3LQ587J8 217 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 FAM122CQ6P4D5 195 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 Q6YL49 198 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CYP2G1PQ6ZSU1 146 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 FAM223AQ8IWN6 122 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 TMEM86BQ8N661 226 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 STPG3Q8N7X2 389 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 ZNF418Q8TF45 676 aaPredicted RBP4.9□□□□□ -1.63
LIG3-206ENST00000586058 SFT2D1Q8WV19 159 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 EEF1AKMT3Q96AZ1 226 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 MGST2Q99735 147 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 HSPB9Q9BQS6 159 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 MRPL32Q9BYC8 188 aaKnown RBP4.9□□□□□ -1.63
LIG3-206ENST00000586058 MAP1LC3BQ9GZQ8 125 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 EIF5A2Q9GZV4 153 aaKnown RBP4.9□□□□□ -1.63
LIG3-206ENST00000586058 SLC25A22Q9H936 323 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 MANBALQ9NQG1 85 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 TNFRSF19Q9NS68 423 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 TMEM160Q9NX00 188 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 CDC42EP3Q9UKI2 254 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 SPTAN1Q13813 2472 aaKnown RBP4.9□□□□□ -1.63
LIG3-206ENST00000586058 PLXNB1O43157 2135 aa4.9□□□□□ -1.63
LIG3-206ENST00000586058 LRRK2Q5S007 2527 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 ELOA3CA0A087WX78 387 aaPredicted RBP4.89□□□□□ -1.63
LIG3-206ENST00000586058 TRBV7-1A0A0A6YYK4 115 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 A0A0G2JLM5 398 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 A0A1B0GV50 99 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 KRBOX1C9JBD0 128 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 E7EUB6 86 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 I3L521 148 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 J3KRW8 73 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 NUPL2O15504 423 aaKnown RBP4.89□□□□□ -1.63
LIG3-206ENST00000586058 HOXA3O43365 443 aaPredicted RBP4.89□□□□□ -1.63
LIG3-206ENST00000586058 CXorf1O96002 111 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 IGHG2P01859 326 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 OR5G3P0C626 314 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 LINC00869P0C866 280 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 SRD5A1P18405 259 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 PSMB3P49720 205 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TPPP2P59282 170 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TNP2Q05952 138 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 PEA15Q15121 130 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 C10orf113Q5VZT2 155 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 MIC13Q5XKP0 118 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 PVRIGQ6DKI7 326 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 CENPVQ7Z7K6 275 aaPredicted RBP4.89□□□□□ -1.63
LIG3-206ENST00000586058 NECAP1Q8NC96 275 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 OR5T1Q8NG75 326 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 OR4X1Q8NH49 305 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 VN1R17PQ8TDU5 208 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 GATAD1Q8WUU5 269 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TMEM170AQ8WVE7 144 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 NPIPB3Q92617 1050 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 MARC2Q969Z3 335 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
LIG3-206ENST00000586058 TRGV9Q99603 122 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TXN2Q99757 166 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 TREM1Q9NP99 234 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 C21orf62Q9NYP8 219 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 FBXL7Q9UJT9 491 aa4.89□□□□□ -1.63
LIG3-206ENST00000586058 IGLV11-55A0A075B6I3 123 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 A0A1B0GW64 132 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 OR7C2O60412 319 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 CLN5O75503 358 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 OR2J3O76001 311 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 TRGV3P03979 118 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 IGF1P05019 195 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 FAM157CP0CG43 387 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 CRIP2P52943 208 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms