RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ECSCRQ19T08 205 aa9.21□□□□□ -0.94
TOP3A-217ENST00000584582 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-217ENST00000584582 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.94
TOP3A-217ENST00000584582 DNAJC4Q9NNZ3 241 aa9.21□□□□□ -0.94
TOP3A-217ENST00000584582 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.94
TOP3A-217ENST00000584582 PGPA6NDG6 321 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 SEC14L6B5MCN3 397 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM250H0YL14 139 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 USF1P22415 310 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-217ENST00000584582 GPR6P46095 362 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-217ENST00000584582 ZNF137PP52743 207 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 TIMM9Q9Y5J7 89 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 TSTD3H0UI37 97 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 LINC00305Q7Z4B0 112 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 PDPNQ86YL7 162 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 CLEC7AQ9BXN2 247 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 DLL1O00548 723 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 SOD3P08294 240 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 SLC25A48Q6ZT89 311 aaKnown RBP9.2□□□□□ -0.94
TOP3A-217ENST00000584582 OR1L6Q8NGR2 347 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 SFRP2Q96HF1 295 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 RITA1Q96K30 269 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 ZMAT5Q9UDW3 170 aaKnown RBP9.2□□□□□ -0.94
TOP3A-217ENST00000584582 C2CD3Q4AC94 2353 aa9.2□□□□□ -0.94
TOP3A-217ENST00000584582 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 RPL11P62913 178 aaKnown RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 OR1L4Q8NGR5 311 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 OSR1Q8TAX0 266 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 VKORC1Q9BQB6 163 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 SEBOXQ9HB31 216 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 H0YJW9 148 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 RBFOX2O43251 390 aaKnown RBP eCLIP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 IGHV1-8P0DP01 117 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 PRCDQ00LT1 54 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM133Q9H2Q1 129 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 E7EUB6 86 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 TIMM23O14925 209 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 NBL1P41271 181 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 VDAC2P45880 294 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 SSBP2P81877 361 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-217ENST00000584582 KLRB1Q12918 225 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 RASL11BQ9BPW5 248 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 ZNF462Q96JM2 2506 aa9.19□□□□□ -0.94
TOP3A-217ENST00000584582 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 GNG7O60262 68 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 HTR1DP28221 377 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 CDX1P47902 265 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-217ENST00000584582 PRSS8Q16651 343 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 MS4A10Q96PG2 267 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 SCRT1Q9BWW7 348 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 TUBA4BQ9H853 241 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 CXorf65A6NEN9 183 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 CRISP2P16562 243 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 MFAP2P55001 183 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 ZNF705AQ6ZN79 300 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-217ENST00000584582 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 AMMECR1Q9Y4X0 333 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-217ENST00000584582 J3KRW8 73 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 LHBP01229 141 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 CSN3P07498 182 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 LOXP28300 417 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-217ENST00000584582 MC5RP33032 325 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 TMEM144Q7Z5S9 345 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 LINC01551Q86U37 167 aa9.18□□□□□ -0.94
TOP3A-217ENST00000584582 IGHV2-26A0A0B4J1V2 119 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 IGHV3-66A0A0C4DH42 116 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 MEF2CQ06413 473 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-217ENST00000584582 CD69Q07108 199 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 MMD2Q8IY49 270 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 LOC105371242A0A075B767 164 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 GATCO43716 136 aaKnown RBP9.17□□□□□ -0.94
TOP3A-217ENST00000584582 HLA-DRB5Q30154 266 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 CGB1A6NKQ9 187 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 ZNF253O75346 499 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 HYPMO75409 117 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 NPPCP23582 126 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 WT1-ASQ06250 92 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 IBA57Q5T440 356 aaKnown RBP9.17□□□□□ -0.94
TOP3A-217ENST00000584582 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 GSN-AS1Q9NRJ2 163 aa9.17□□□□□ -0.94
TOP3A-217ENST00000584582 PITPNC1Q9UKF7 332 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms