RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SMPXQ9UHP9 88 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 IGHV3-49A0A0A0MS15 119 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 SRPXP78539 464 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 LINC00322Q6ZN03 302 aaPredicted RBP15.29■□□□□ 0.04
SS18-224ENST00000584083 LYZL2Q7Z4W2 148 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 LGI3Q8N145 548 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 ZNF414Q96IQ9 312 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 CACFD1Q9UGQ2 172 aa15.29■□□□□ 0.04
SS18-224ENST00000584083 A0A0B4J2A0 478 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 IGHV7-4-1A0A0J9YVY3 117 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 TSPAN4O14817 238 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 TMEM50AO95807 157 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 INPP1P49441 399 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 MLANAQ16655 118 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 BSXQ3C1V8 233 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 TMEM116Q8NCL8 245 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 DEDD2Q8WXF8 326 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 OR10C1Q96KK4 312 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 SLC25A21Q9BQT8 299 aaPredicted RBP15.28■□□□□ 0.04
SS18-224ENST00000584083 GINS3Q9BRX5 216 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 RHPN1-AS1Q9BWJ2 59 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 SHPKQ9UHJ6 478 aa15.28■□□□□ 0.04
SS18-224ENST00000584083 TRAV14DV4A0A0A6YYC5 116 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 CCR6P51684 374 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 SMCO1Q147U7 214 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 TOMM20LQ6UXN7 152 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 ZNF600Q6ZNG1 722 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 SRRQ9GZT4 340 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 HIPK2Q9H2X6 1198 aa15.27■□□□□ 0.04
SS18-224ENST00000584083 FNDC4Q9H6D8 234 aaPredicted RBP15.27■□□□□ 0.04
SS18-224ENST00000584083 PIGBOS1A0A0B4J2F0 54 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 RPS10-NUDT3A0A1W2PQS6 291 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 C3orf84H3BNL1 204 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 CHEK1O14757 476 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 VAMP1P23763 118 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 TMEM128Q5BJH2 165 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 NMSQ5H8A3 153 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 SLC24A4Q8NFF2 622 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 MUC7Q8TAX7 377 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 CITED4Q96RK1 184 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 RNF2Q99496 336 aa15.26■□□□□ 0.03
SS18-224ENST00000584083 MRPL36Q9P0J6 103 aaKnown RBP15.26■□□□□ 0.03
SS18-224ENST00000584083 PUS1Q9Y606 427 aaKnown RBP eCLIP15.26■□□□□ 0.03
SS18-224ENST00000584083 NBEAL2Q6ZNJ1 2754 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 IGHV3OR16-13A0A075B7E8 117 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 IGHV3-74A0A0B4J1X5 117 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 CLN5O75503 358 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 C2orf83Q53S99 150 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 TRIQKQ629K1 86 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 OR4X1Q8NH49 305 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 RETNQ9HD89 108 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 UBQLN2Q9UHD9 624 aa15.25■□□□□ 0.03
SS18-224ENST00000584083 BMI1P35226 326 aa15.24■□□□□ 0.03
SS18-224ENST00000584083 NOXA1Q86UR1 476 aa15.24■□□□□ 0.03
SS18-224ENST00000584083 OR1S1Q8NH92 325 aa15.24■□□□□ 0.03
SS18-224ENST00000584083 RNASEH2CQ8TDP1 164 aaKnown RBP15.24■□□□□ 0.03
SS18-224ENST00000584083 IGKV3-7A0A075B6H7 116 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 LOC102724200A0A096LPH7 203 aaPredicted RBP15.23■□□□□ 0.03
SS18-224ENST00000584083 IFNA10P01566 189 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 NPY1RP25929 384 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 BAK1Q16611 211 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 CENPSQ8N2Z9 138 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 FAM110AQ9BQ89 295 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 GGTLC1Q9BX51 225 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 RBKSQ9H477 322 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 ZFAND3Q9H8U3 227 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 NDUFA13Q9P0J0 144 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 HSPB7Q9UBY9 170 aa15.23■□□□□ 0.03
SS18-224ENST00000584083 TRAV30A0A087WSZ9 112 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 A0A1B0GU03 582 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 LINC00854A0A1B0GVQ3 168 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 DUXBA0A1W2PPF3 345 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 SLC25A4P12235 298 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 TFPI2P48307 235 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 RBMS2Q15434 407 aaKnown RBP15.22■□□□□ 0.03
SS18-224ENST00000584083 DTD1Q8TEA8 209 aa15.22■□□□□ 0.03
SS18-224ENST00000584083 LYL1P12980 280 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 RND2P52198 227 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 PPP1R1AQ13522 171 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 TIGITQ495A1 244 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 ETFRF1Q6IPR1 90 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 TCF24Q7RTU0 167 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 ST8SIA2Q92186 375 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 EDA2RQ9HAV5 297 aa15.21■□□□□ 0.03
SS18-224ENST00000584083 IGHV3-66A0A0C4DH42 116 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 NAP1L6A6NFF2 107 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 SFT2D2O95562 160 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 APOHP02749 345 aaPredicted RBP15.2■□□□□ 0.02
SS18-224ENST00000584083 NPPCP23582 126 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 ODF3L2Q3SX64 289 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 PRSS54Q6PEW0 395 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 GBGT1Q8N5D6 347 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 U3KQ87 197 aa15.2■□□□□ 0.02
SS18-224ENST00000584083 IGKV1-17P01599 117 aa15.19■□□□□ 0.02
SS18-224ENST00000584083 CD5P06127 495 aa15.19■□□□□ 0.02
SS18-224ENST00000584083 RPL11P62913 178 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms