RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 DTD1Q8TEA8 209 aa16.8■□□□□ 0.28
SMARCD2-206ENST00000577990 CACNG8Q8WXS5 425 aa16.8■□□□□ 0.28
SMARCD2-206ENST00000577990 RBKSQ9H477 322 aa16.8■□□□□ 0.28
SMARCD2-206ENST00000577990 TECRQ9NZ01 308 aaKnown RBP16.8■□□□□ 0.28
SMARCD2-206ENST00000577990 GNG7O60262 68 aa16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 NPBWR1P48145 328 aa16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 RELQ04864 619 aaPredicted RBP16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 DEFB114Q30KQ6 69 aa16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 CD300EQ496F6 205 aaPredicted RBP16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 FNDC4Q9H6D8 234 aaPredicted RBP16.79■□□□□ 0.28
SMARCD2-206ENST00000577990 IZUMO1RA6ND01 250 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 TCRBP04435 133 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 NPY1RP25929 384 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 GGNBP1Q5YKI7 109 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 NOXA1Q86UR1 476 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 UXS1Q8NBZ7 420 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 MARC2Q969Z3 335 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 TBC1D24Q9ULP9 559 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 SMAD5-AS1Q9Y6J3 95 aa16.78■□□□□ 0.28
SMARCD2-206ENST00000577990 RPS10-NUDT3A0A1W2PQS6 291 aa16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 C8orf88P0DMB2 117 aa16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 RNASEH2CQ8TDP1 164 aaKnown RBP16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 TMEM170AQ8WVE7 144 aa16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 MRPL27Q9P0M9 148 aaKnown RBP16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 U3KQ87 197 aa16.77■□□□□ 0.28
SMARCD2-206ENST00000577990 FAM90A26D6RGX4 464 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 UPK1BO75841 260 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 IFNA10P01566 189 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 CD69Q07108 199 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 ASAH1Q13510 395 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 MZT2BQ6NZ67 158 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 ZNF414Q96IQ9 312 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 B9D2Q9BPU9 175 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 C20orf24Q9BUV8 137 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 DAZ1Q9NQZ3 744 aaKnown RBP16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 MRPL36Q9P0J6 103 aaKnown RBP16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 MLXQ9UH92 298 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 TENM3Q9P273 2699 aa16.76■□□□□ 0.27
SMARCD2-206ENST00000577990 TRAV6A0A075B6T7 132 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 FAM240BA0A1B0GVZ2 78 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 ADAP1O75689 374 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 MLANAQ16655 118 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 OR4X1Q8NH49 305 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 NUDT15Q9NV35 164 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 NBEAL2Q6ZNJ1 2754 aa16.75■□□□□ 0.27
SMARCD2-206ENST00000577990 IGHV3OR16-8A0A075B7F1 116 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 C15orf62A8K5M9 175 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 K7EMT4 169 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 CLN5O75503 358 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 MED6O75586 246 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 YIF1AO95070 293 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 TMEM50AO95807 157 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 IFNA21P01568 189 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 BTNL8Q6UX41 500 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 OR52B4Q8NGK2 314 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 SELENOKQ9Y6D0 94 aa16.74■□□□□ 0.27
SMARCD2-206ENST00000577990 SCGB2A1O75556 95 aa16.73■□□□□ 0.27
SMARCD2-206ENST00000577990 ATP5IP56385 69 aaPredicted RBP16.73■□□□□ 0.27
SMARCD2-206ENST00000577990 GTSCR1Q86UQ5 136 aa16.73■□□□□ 0.27
SMARCD2-206ENST00000577990 Q8N1Y9 231 aa16.73■□□□□ 0.27
SMARCD2-206ENST00000577990 MITD1Q8WV92 249 aa16.73■□□□□ 0.27
SMARCD2-206ENST00000577990 ZNF785A8K8V0 405 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 ZNF207O43670 478 aaKnown RBP16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 IAPPP10997 89 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 SLC25A4P12235 298 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 GUCA2BQ16661 112 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 ETFRF1Q6IPR1 90 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 PRSS54Q6PEW0 395 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 ZNF600Q6ZNG1 722 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 TMEM61Q8N0U2 210 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 WDR89Q96FK6 387 aaPredicted RBP16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 OR10C1Q96KK4 312 aa16.72■□□□□ 0.27
SMARCD2-206ENST00000577990 MPTX1A8MV57 137 aa16.71■□□□□ 0.27
SMARCD2-206ENST00000577990 H2AFB2P0C5Z0 115 aa16.71■□□□□ 0.27
SMARCD2-206ENST00000577990 RND2P52198 227 aa16.71■□□□□ 0.27
SMARCD2-206ENST00000577990 CIB3Q96Q77 187 aaPredicted RBP16.71■□□□□ 0.27
SMARCD2-206ENST00000577990 MAGT1Q9H0U3 335 aa16.71■□□□□ 0.27
SMARCD2-206ENST00000577990 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 SYNGR2O43760 224 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 IFNA4P05014 189 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 IFITM3Q01628 133 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 TOMM20LQ6UXN7 152 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 SLC16A13Q7RTY0 426 aa16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 PUS1Q9Y606 427 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMARCD2-206ENST00000577990 STAB2Q8WWQ8 2551 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 KMT2CQ8NEZ4 4911 aaKnown RBP16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 TRAV25A0A0B4J276 109 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 TMEM116Q8NCL8 245 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 OR1S2Q8NGQ3 325 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 ENKURQ8TC29 256 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 ZNF431Q8TF32 576 aaPredicted RBP16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 SEC22CQ9BRL7 303 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 GINS3Q9BRX5 216 aa16.69■□□□□ 0.26
SMARCD2-206ENST00000577990 IGHV7-4-1A0A0J9YVY3 117 aa16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 WRBO00258 174 aa16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 SCAF4O95104 1147 aaKnown RBP16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 IGKV1-17P01599 117 aa16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 IGHV4-30-4P0DP06 118 aa16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 CD81P60033 236 aa16.68■□□□□ 0.26
SMARCD2-206ENST00000577990 ID3Q02535 119 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms