RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ERHP84090 104 aaKnown RBP11.14□□□□□ -0.63
COMMD4-225ENST00000569245 DEFA5Q01523 94 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 WT1-ASQ06250 92 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 BSXQ3C1V8 233 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 ACOT7LQ6ZUV0 252 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 OR10W1Q8NGF6 305 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 AQP10Q96PS8 301 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 PRR25Q96S07 402 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 FAM24AA6NFZ4 105 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 ARPC5O15511 151 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 BRI3O95415 125 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 PRH1P02810 166 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 ZP3P21754 424 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 RPL12P30050 165 aaKnown RBP11.13□□□□□ -0.63
COMMD4-225ENST00000569245 NUP62P37198 522 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-225ENST00000569245 HTR2BP41595 481 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 CAV2P51636 162 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
COMMD4-225ENST00000569245 ZNF345Q14585 488 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 TMEM14EPQ6UXP3 125 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 TMEM252Q8N6L7 170 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 INO80EQ8NBZ0 244 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-225ENST00000569245 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 SLC25A31Q9H0C2 315 aa11.13□□□□□ -0.63
COMMD4-225ENST00000569245 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
COMMD4-225ENST00000569245 RNF222A6NCQ9 220 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 H3BP45 60 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 EIF2B2P49770 351 aaKnown RBP11.12□□□□□ -0.63
COMMD4-225ENST00000569245 RHOGP84095 191 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 BAXQ07812 192 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 OR2F1Q13607 317 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 SPANXN5Q5MJ07 72 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 C9orf62Q8N4C0 152 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 SLC24A4Q8NFF2 622 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 OR4C12Q96R67 309 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
COMMD4-225ENST00000569245 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
COMMD4-225ENST00000569245 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-225ENST00000569245 A0A0D9SG52 128 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 IGSF23A1L1A6 192 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 IFNA10P01566 189 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 CRYGCP07315 174 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 AREGP15514 252 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 CXCL2P19875 107 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 SNCAP37840 140 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 SULT1A1P50225 295 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 NKX2-5P52952 324 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 EWSR1Q01844 656 aaKnown RBP eCLIP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 CD69Q07108 199 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-225ENST00000569245 C2orf83Q53S99 150 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 LAMTOR1Q6IAA8 161 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 TMEM170AQ8WVE7 144 aa11.11□□□□□ -0.63
COMMD4-225ENST00000569245 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 NPIPB5A8MRT5 1133 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 CTRB1P17538 263 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 NPY1RP25929 384 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 RAB11AP62491 216 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 CTRB2Q6GPI1 263 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 STX12Q86Y82 276 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 NECAP1Q8NC96 275 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 HSPB11Q9Y547 144 aa11.1□□□□□ -0.63
COMMD4-225ENST00000569245 OR2J3O76001 311 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 DEFA4P12838 97 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
COMMD4-225ENST00000569245 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 OR1P1Q8NH06 330 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 ZC4H2Q9NQZ6 224 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
COMMD4-225ENST00000569245 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
COMMD4-225ENST00000569245 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 CST7O76096 145 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 REG1AP05451 166 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 S100A11P31949 105 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-225ENST00000569245 NHLH2Q02577 135 aa11.08□□□□□ -0.64
COMMD4-225ENST00000569245 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-225ENST00000569245 C19orf35Q6ZS72 473 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms