RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
CLN6-208ENST00000567060 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 MCRIP2Q9BUT9 160 aaKnown RBP12.86□□□□□ -0.35
CLN6-208ENST00000567060 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 PSENENQ9NZ42 101 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
CLN6-208ENST00000567060 IGHV4OR15-8A0A075B7B6 117 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 TRAV30A0A087WSZ9 112 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 A0A087WW49 117 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 L7N2F9 121 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 H2BFSP57053 126 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 RRAS2P62070 204 aaPredicted RBP12.85□□□□□ -0.35
CLN6-208ENST00000567060 VAMP2P63027 116 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 OR4X1Q8NH49 305 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
CLN6-208ENST00000567060 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
CLN6-208ENST00000567060 ANKRD34BA5PLL1 514 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 TGOLN2O43493 480 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 CLEC3BP05452 202 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 HOXD3P31249 432 aaPredicted RBP12.84□□□□□ -0.35
CLN6-208ENST00000567060 ARL3P36405 182 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 DEFA5Q01523 94 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 CD69Q07108 199 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 SPANXN5Q5MJ07 72 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
CLN6-208ENST00000567060 RCC1LQ96I51 464 aaKnown RBP12.84□□□□□ -0.35
CLN6-208ENST00000567060 FNDC10F2Z333 226 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 BMPR1BO00238 502 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 NUPL2O15504 423 aaKnown RBP12.83□□□□□ -0.36
CLN6-208ENST00000567060 GNG7O60262 68 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 DEDDO75618 318 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 CD33P20138 364 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 PAX9P55771 341 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
CLN6-208ENST00000567060 RAB32Q13637 225 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 Q56UQ5 140 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 TMEM14EPQ6UXP3 125 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
CLN6-208ENST00000567060 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
CLN6-208ENST00000567060 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
CLN6-208ENST00000567060 TENM3Q9P273 2699 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 E5RGE8 158 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 LGALS9O00182 355 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 CLN5O75503 358 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 SIX6O95475 246 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 GPR183P32249 361 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 S100A10P60903 97 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
CLN6-208ENST00000567060 FAM106AQ4KMX7 169 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 C11orf1Q9H5F2 150 aa12.82□□□□□ -0.36
CLN6-208ENST00000567060 LYRM2Q9NU23 88 aaPredicted RBP12.82□□□□□ -0.36
CLN6-208ENST00000567060 F8W735 103 aaPredicted RBP12.81□□□□□ -0.36
CLN6-208ENST00000567060 OVOL1O14753 267 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 TMEM50AO95807 157 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 TRBV12-3P01733 135 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
CLN6-208ENST00000567060 INSL3P51460 131 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 FGL1Q08830 312 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 FCN2Q15485 313 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 PRSS54Q6PEW0 395 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 OR10P1Q8NGE3 313 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 DUX3Q96PT4 197 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 GGACTQ9BVM4 153 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 PEMTQ9UBM1 199 aa12.81□□□□□ -0.36
CLN6-208ENST00000567060 OR2T8A6NH00 312 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 NDUFA4O00483 81 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 IGHV3-23P01764 117 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 CTSGP08311 255 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 P2RY1P47900 373 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
CLN6-208ENST00000567060 RAP2BP61225 183 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 OR11H7Q8NGC8 314 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 OR1S2Q8NGQ3 325 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
CLN6-208ENST00000567060 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
CLN6-208ENST00000567060 S4R3C0 116 aa12.8□□□□□ -0.36
CLN6-208ENST00000567060 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 PPP5D1E7EU14 171 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 H3BP45 60 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 MPC2O95563 127 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 FABP1P07148 127 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 CXCL3P19876 107 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 CAV2P51636 162 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms