RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 F11RQ9Y624 299 aaKnown RBP10.13□□□□□ -0.79
SPG7-209ENST00000564047 IGSF23A1L1A6 192 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 SCO1O75880 301 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 NDUFA7O95182 113 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 BRI3O95415 125 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 OR8U8P0C7N1 319 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 PPIFP30405 207 aaKnown RBP10.12□□□□□ -0.79
SPG7-209ENST00000564047 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 OR5T1Q8NG75 326 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 TMEM170AQ8WVE7 144 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
SPG7-209ENST00000564047 NOL4LQ96MY1 436 aaPredicted RBP10.12□□□□□ -0.79
SPG7-209ENST00000564047 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 WNT10AQ9GZT5 417 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 LINC00527Q9UJ94 153 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 KLK9Q9UKQ9 250 aa10.12□□□□□ -0.79
SPG7-209ENST00000564047 CARHSP1Q9Y2V2 147 aaKnown RBP10.12□□□□□ -0.79
SPG7-209ENST00000564047 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 CYB5BO43169 146 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 APOC3P02656 99 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 METTL15P1P0C7V9 234 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 DEFA4P12838 97 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 SULT1A1P50225 295 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 CFHR3Q02985 330 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 TMEM95Q3KNT9 176 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 ETV3LQ6ZN32 361 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 Q6ZRG5 221 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 STX12Q86Y82 276 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
SPG7-209ENST00000564047 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
SPG7-209ENST00000564047 TNCP24821 2201 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 H3BUA1 57 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 CORTO00230 105 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 SOX15O60248 233 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 IFNA4P05014 189 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
SPG7-209ENST00000564047 MFAP2P55001 183 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 SLC35B1P78383 322 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 NHLH2Q02577 135 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 SLC25A24Q6NUK1 477 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 C12orf54Q6X4T0 127 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 C19orf35Q6ZS72 473 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 SVBPQ8N300 66 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 OR10P1Q8NGE3 313 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 DMRT1Q9Y5R6 373 aa10.1□□□□□ -0.79
SPG7-209ENST00000564047 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
SPG7-209ENST00000564047 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 UMAD1C9J7I0 102 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 PRSS46E5RG02 174 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 DFFBO76075 338 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 CST7O76096 145 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 IGLV1-40P01703 118 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 IGHG4P01861 327 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 HBG1P69891 147 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 HBG2P69892 147 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 HAPLN4Q86UW8 402 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 OR4F5Q8NH21 305 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 PINX1Q96BK5 328 aaKnown RBP10.09□□□□□ -0.79
SPG7-209ENST00000564047 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
SPG7-209ENST00000564047 NARS2Q96I59 477 aaKnown RBP10.09□□□□□ -0.79
SPG7-209ENST00000564047 HRH4Q9H3N8 390 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 UQCC1Q9NVA1 299 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 THYN1Q9P016 225 aa10.09□□□□□ -0.79
SPG7-209ENST00000564047 TMA7Q9Y2S6 64 aaKnown RBP10.09□□□□□ -0.79
SPG7-209ENST00000564047 TRBV9A0A0B4J1U6 114 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 PSMB11A5LHX3 300 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 PRH1P02810 166 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 CD5P06127 495 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
SPG7-209ENST00000564047 ARL16Q0P5N6 197 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 ATP6V1FQ16864 119 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 OR8G2PQ6IF36 304 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 TMEM217Q8N7C4 229 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 LINC01006Q8NI28 216 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 CACNG8Q8WXS5 425 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 TAF15Q92804 592 aaKnown RBP eCLIP10.08□□□□□ -0.8
SPG7-209ENST00000564047 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 ATP5SQ99766 215 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 GGACTQ9BVM4 153 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 NKX6-2Q9C056 277 aaPredicted RBP10.08□□□□□ -0.8
SPG7-209ENST00000564047 TREM1Q9NP99 234 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 ZNF355PQ9NSJ1 428 aa10.08□□□□□ -0.8
SPG7-209ENST00000564047 OR2J3O76001 311 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 TSPAN15O95858 294 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 OPRK1P41145 380 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 CAMLGP49069 296 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 DLK1P80370 383 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 DEFA5Q01523 94 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 CD69Q07108 199 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 BTN1A1Q13410 526 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 TEX38Q6PEX7 206 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms