RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 COL4A1P02462 1669 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 OR51F1A6NGY5 319 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 RFXAPO00287 272 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 ATP6V0E1O15342 81 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 MFAP2P55001 183 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 ERCC8Q13216 396 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 IQCJQ1A5X6 159 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 UFSP1Q6NVU6 142 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 MSRB3Q8IXL7 192 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 KCNRGQ8N5I3 272 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 NUP35Q8NFH5 326 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 ZNF501Q96CX3 271 aaPredicted RBP3.7□□□□□ -1.82
SMG1-207ENST00000563235 SPIN2AQ99865 258 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 SPIN2BQ9BPZ2 258 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 ZNF471Q9BX82 626 aaPredicted RBP3.7□□□□□ -1.82
SMG1-207ENST00000563235 IER3IP1Q9Y5U9 82 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 IGKV6D-41A0A0C4DH26 115 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 MUC21A0A0G2JKD1 596 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 NAP1L6A6NFF2 107 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 RBMXP38159 391 aaKnown RBP3.7□□□□□ -1.82
SMG1-207ENST00000563235 RPS11P62280 158 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMG1-207ENST00000563235 MORN5Q5VZ52 161 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 Q6AWC8 147 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 WFDC11Q8NEX6 87 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 OR4K13Q8NH42 304 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 OR52P1PQ8NH57 321 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 DPH3Q96FX2 82 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 BBC3Q96PG8 261 aaPredicted RBP3.7□□□□□ -1.82
SMG1-207ENST00000563235 S100A13Q99584 98 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 TM2D3Q9BRN9 247 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 VAMP8Q9BV40 100 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 BET1LQ9NYM9 111 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 DKK2Q9UBU2 259 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 FUT9Q9Y231 359 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 MKI67P46013 3256 aaKnown RBP3.7□□□□□ -1.82
SMG1-207ENST00000563235 DSPPQ9NZW4 1301 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 COL11A1P12107 1806 aaPredicted RBP3.69□□□□□ -1.82
SMG1-207ENST00000563235 ANKRD36A6QL64 1941 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 TRGV10A0A0A0MS01 117 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 TEX48A0A1B0GUV7 120 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 E9PLD3 99 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 H3BQ15 152 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 FCGR3AP08637 254 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 CRISP2P16562 243 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 CRYBB3P26998 211 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 INPP1P49441 399 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 EIF5AP63241 154 aaKnown RBP3.69□□□□□ -1.82
SMG1-207ENST00000563235 HES1Q14469 280 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 C6orf99Q4VX62 202 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 DCANP1Q8TF63 244 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 IGKV1-8A0A0C4DH67 115 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 K7EQD1 137 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 CDC42EP2O14613 210 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 FOXS1O43638 330 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 MT-ATP8P03928 68 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 P0DMU3 169 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 FAM231AP0DMU4 169 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 FAM231CP0DMU5 169 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 SLC25A4P12235 298 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 RBMY1FQ15415 496 aaKnown RBP3.69□□□□□ -1.82
SMG1-207ENST00000563235 Q6Q795 121 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 RPS19BP1Q86WX3 136 aaKnown RBP3.69□□□□□ -1.82
SMG1-207ENST00000563235 OR4A5Q8NH83 315 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 HIST1H2BLQ99880 126 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 CACFD1Q9UGQ2 172 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 MIA3Q5JRA6 1907 aa3.69□□□□□ -1.82
SMG1-207ENST00000563235 RANBP2P49792 3224 aaKnown RBP3.69□□□□□ -1.82
SMG1-207ENST00000563235 PDCD11Q14690 1871 aaKnown RBP3.68□□□□□ -1.82
SMG1-207ENST00000563235 TRBV12-3P01733 135 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 TRGC2P03986 189 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 ELK1P19419 428 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 RPS21P63220 83 aaKnown RBP3.68□□□□□ -1.82
SMG1-207ENST00000563235 CST6Q15828 149 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 HEPN1Q6WQI6 88 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 OR1J4Q8NGS1 313 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 TSLPQ969D9 159 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 FAM3DQ96BQ1 224 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 DPY30Q9C005 99 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 XCL2Q9UBD3 114 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 SELENOKQ9Y6D0 94 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 CCL15-CCL14A0A0B4J2E2 113 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 M0R381 172 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 UBL3O95164 117 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 IFITM1P13164 125 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 NFYBP25208 207 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 VDAC2P45880 294 aaPredicted RBP3.68□□□□□ -1.82
SMG1-207ENST00000563235 NMUP48645 174 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 CRADDP78560 199 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 C12orf73Q69YU5 71 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 Q6ZUT4 128 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 C9orf40Q8IXQ3 194 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 NEURL3Q96EH8 262 aa3.68□□□□□ -1.82
SMG1-207ENST00000563235 CNRIP1Q96F85 164 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms