RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 A6NDX4 124 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 CAMLGP49069 296 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 RUNX1Q01196 453 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 LY6EQ16553 131 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 MLANAQ16655 118 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 C5orf56Q8N8D9 126 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
RABGGTA-209ENST00000559551 MTORP42345 2549 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 A0A1W2PN81 502 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 LINC01548A6NM66 108 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 ACTL6BO94805 426 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 LY86O95711 162 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 CHRNA7P36544 502 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 FXYD3Q14802 87 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 VWC2Q2TAL6 325 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 ISOC2Q96AB3 205 aa11.3□□□□□ -0.6
RABGGTA-209ENST00000559551 HLA-DRB1P01911 266 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 BPIFB3P59826 476 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 HBG1P69891 147 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 HBG2P69892 147 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 ZNF562Q6V9R5 426 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 CD5LO43866 347 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 LILRB2Q8N423 598 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 SMR3AQ99954 134 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 CUBNO60494 3623 aa11.29□□□□□ -0.6
RABGGTA-209ENST00000559551 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 CNIH1O95406 144 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 HOXA5P20719 270 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 ZNF114Q8NC26 417 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 DFFBO76075 338 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 OR2C1O95371 312 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 S100A2P29034 98 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 IER3P46695 156 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 SSTP61278 116 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 ZNF266Q14584 549 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 TMEM147Q9BVK8 224 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 WDR61Q9GZS3 305 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 MOB4Q9Y3A3 225 aa11.28□□□□□ -0.6
RABGGTA-209ENST00000559551 PRH1P02810 166 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 RAB11AP62491 216 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 Q6ZS46 218 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 YPEL4Q96NS1 127 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 PFDN5Q99471 154 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 PRDM13Q9H4Q3 707 aa11.27□□□□□ -0.61
RABGGTA-209ENST00000559551 DLK1P80370 383 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 ATP6V1FQ16864 119 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 RASL11BQ9BPW5 248 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 ATP6V0E1O15342 81 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 FOSL1P15407 271 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 Q6YL49 198 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 WDR83OSQ9Y284 106 aa11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-209ENST00000559551 IGKV1OR2-108A0A075B7D4 117 aa11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 DEFA6Q01524 100 aa11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 CD69Q07108 199 aa11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 SRSF8Q9BRL6 282 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-209ENST00000559551 A0A087WWC5 75 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 CRYGCP07315 174 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 CD81P60033 236 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 BLCAPP62952 87 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
RABGGTA-209ENST00000559551 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms