RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PRR20EP86478 221 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PRR20CP86479 221 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PRR20DP86480 221 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PRR20BP86481 221 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PRR20AP86496 221 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 ZNF726P1Q15940 193 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 CYB5R2Q6BCY4 276 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
TPM1-215ENST00000558868 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 OR2T6Q8NHC8 308 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 PITPNC1Q9UKF7 332 aa10.93□□□□□ -0.66
TPM1-215ENST00000558868 IGHV7-81A0A0B4J1V7 117 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 M0QZK8 103 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 MT-CO2P00403 227 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 APELAP0DMC3 54 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 RHOBP62745 196 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 MLANAQ16655 118 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
TPM1-215ENST00000558868 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 TMEM116Q8NCL8 245 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 NPIPB3Q92617 1050 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 RAB24Q969Q5 203 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 RNF2Q99496 336 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 SSX3Q99909 188 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 SLC25A33Q9BSK2 321 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
TPM1-215ENST00000558868 SLC25A22Q9H936 323 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 THYN1Q9P016 225 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 AKAP9Q99996 3911 aa10.92□□□□□ -0.66
TPM1-215ENST00000558868 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 ZFP92A6NM28 416 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 F8W036 122 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 YIF1AO95070 293 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 FABP1P07148 127 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 HIST1H1BP16401 226 aaKnown RBP10.91□□□□□ -0.66
TPM1-215ENST00000558868 RND2P52198 227 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 MFAP2P55001 183 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 CCL20P78556 96 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 SRSF3P84103 164 aaKnown RBP10.91□□□□□ -0.66
TPM1-215ENST00000558868 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 ZNF506Q5JVG8 444 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 CCDC28AQ8IWP9 274 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 TRGV9Q99603 122 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 SEC11CQ9BY50 192 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
TPM1-215ENST00000558868 AVPP01185 164 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 SFTA3P0C7M3 94 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 LINC00869P0C866 280 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 PSMB3P49720 205 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 KRTAP1-3Q8IUG1 177 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 OR1L4Q8NGR5 311 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 SGMS2Q8NHU3 365 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 PIFOQ8TCI5 191 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.66
TPM1-215ENST00000558868 SCRT1Q9BWW7 348 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 SLC35B3Q9H1N7 401 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
TPM1-215ENST00000558868 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
TPM1-215ENST00000558868 IGKV1OR2-108A0A075B7D4 117 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 A6NDX4 124 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 I3L2K1 104 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
TPM1-215ENST00000558868 SCGB2A1O75556 95 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 CXorf1O96002 111 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 APOC3P02656 99 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 HSPB1P04792 205 aaKnown RBP10.89□□□□□ -0.67
TPM1-215ENST00000558868 BCL2P10415 239 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
TPM1-215ENST00000558868 NDPQ00604 133 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 HAGHQ16775 308 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 SSX7Q7RTT5 188 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 MAPK1IP1LQ8NDC0 245 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 OR4X1Q8NH49 305 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
TPM1-215ENST00000558868 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 PFDN5Q99471 154 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 FOXC2Q99958 501 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 TNFRSF19Q9NS68 423 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 HIVEP1P15822 2718 aa10.89□□□□□ -0.67
TPM1-215ENST00000558868 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 H3BUX3 64 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 EGR2P11161 476 aaPredicted RBP10.88□□□□□ -0.67
TPM1-215ENST00000558868 TAS2R45P59539 299 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 ASPHD1Q5U4P2 390 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 SVBPQ8N300 66 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 MRPL32Q9BYC8 188 aaKnown RBP10.88□□□□□ -0.67
TPM1-215ENST00000558868 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
TPM1-215ENST00000558868 PLXNB1O43157 2135 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms