RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 WFDC1Q9HC57 220 aa11.36□□□□□ -0.59
SHMT2-208ENST00000553868 HYDINQ4G0P3 5121 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 NDUFA7O95182 113 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 AMY1AP04745 511 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 REG1AP05451 166 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 CRYGCP07315 174 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 CTRB1P17538 263 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 NDPQ00604 133 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 VWC2Q2TAL6 325 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 CTRB2Q6GPI1 263 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 ZNF680Q8NEM1 530 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 TMEM170AQ8WVE7 144 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 GINS3Q9BRX5 216 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 FAM103A1Q9BTL3 118 aaKnown RBP11.35□□□□□ -0.59
SHMT2-208ENST00000553868 ARV1Q9H2C2 271 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 UBQLN2Q9UHD9 624 aa11.35□□□□□ -0.59
SHMT2-208ENST00000553868 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 PRSS46E5RG02 174 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 RGS13O14921 159 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 ATP6V0E1O15342 81 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 MPDU1O75352 247 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 FBXO24O75426 580 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 IGHG2P01859 326 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 APELAP0DMC3 54 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
SHMT2-208ENST00000553868 CRIP2P52943 208 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-208ENST00000553868 PROK1P58294 105 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 IFITM2Q01629 132 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 CD69Q07108 199 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 LFNGQ8NES3 379 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 LINC01006Q8NI28 216 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 SCARB1Q8WTV0 552 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 MISP3Q96FF7 219 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 SLC35E1Q96K37 410 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 NPFFR1Q9GZQ6 430 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 WNT10AQ9GZT5 417 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 THYN1Q9P016 225 aa11.34□□□□□ -0.59
SHMT2-208ENST00000553868 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-208ENST00000553868 SMCO3A2RU48 225 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 AP4M1O00189 453 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 SEC11BP0C7V7 166 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-208ENST00000553868 OPRK1P41145 380 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 AKR1C1Q04828 323 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 RAB31Q13636 194 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 ECSCRQ19T08 205 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 SLC16A13Q7RTY0 426 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 PRSS22Q9GZN4 317 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 WDR61Q9GZS3 305 aaKnown RBP11.33□□□□□ -0.6
SHMT2-208ENST00000553868 NPVFQ9HCQ7 196 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 ZNF580Q9UK33 172 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 WDR83OSQ9Y284 106 aa11.33□□□□□ -0.6
SHMT2-208ENST00000553868 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 C17orf112F2Z3M2 114 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 SOX15O60248 233 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 IGF1P05019 195 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 FGF7P21781 194 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 RAB14P61106 215 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 ALKAL2Q6UX46 152 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 HSD17B11Q8NBQ5 300 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 GAR1Q9NY12 217 aaKnown RBP11.32□□□□□ -0.6
SHMT2-208ENST00000553868 FBXO7Q9Y3I1 522 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 TNCP24821 2201 aa11.32□□□□□ -0.6
SHMT2-208ENST00000553868 SH2D7A6NKC9 451 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-208ENST00000553868 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-208ENST00000553868 SPP1P10451 314 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 ATP6V0CP27449 155 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-208ENST00000553868 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 BTNL8Q6UX41 500 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 LRRC20Q8TCA0 184 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 TMED6Q8WW62 240 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-208ENST00000553868 TIMM9Q9Y5J7 89 aa11.31□□□□□ -0.6
SHMT2-208ENST00000553868 RAB5CP51148 216 aa11.3□□□□□ -0.6
SHMT2-208ENST00000553868 BLCAPP62952 87 aa11.3□□□□□ -0.6
SHMT2-208ENST00000553868 OR5T1Q8NG75 326 aa11.3□□□□□ -0.6
SHMT2-208ENST00000553868 SLC25A32Q9H2D1 315 aa11.3□□□□□ -0.6
SHMT2-208ENST00000553868 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 UMAD1C9J7I0 102 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 H3BUA1 57 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 MT-CO2P00403 227 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 MFAP2P55001 183 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
SHMT2-208ENST00000553868 SERF2P84101 59 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 GAMTQ14353 236 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 OR2G3Q8NGZ4 309 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms