RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PUS1Q9Y606 427 aaKnown RBP eCLIP4.95□□□□□ -1.62
PRPF40B-214ENST00000551320 IGHV4-4A0A075B6R2 117 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 A0A0G2JRQ6 117 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 K7EMT4 169 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 RBFOX2O43251 390 aaKnown RBP eCLIP4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 SNAPC5O75971 98 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 NXPH3O95157 252 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 IGKV3-20P01619 116 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 EIF4EP06730 217 aaKnown RBP4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 FGF9P31371 208 aaPredicted RBP4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 HRH1P35367 487 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 ETV6P41212 452 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 EMP1P54849 157 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 MFAP4P55083 255 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 TAS2R20P59543 309 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM187Q14656 261 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 SP6Q3SY56 376 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 ACTL10Q5JWF8 245 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 SPSB3Q6PJ21 355 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 TBC1D26Q86UD7 250 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 SNX29P2Q8IUI4 249 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 MOB3AQ96BX8 217 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 NXF2Q9GZY0 626 aaKnown RBP4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 THYN1Q9P016 225 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 MUC4Q99102 2169 aa4.94□□□□□ -1.62
PRPF40B-214ENST00000551320 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 C15orf61A6NNL5 157 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 RTL8CO15255 209 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 GNG7O60262 68 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 IGKV1-5P01602 117 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 PRM2P04554 102 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 ARL6IP1Q15041 203 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 TIGITQ495A1 244 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 DHRS11Q6UWP2 260 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM217Q8N7C4 229 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 SAMD12Q8N8I0 201 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 OR5H2Q8NGV7 314 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 OR4A16Q8NH70 328 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 SEC22AQ96IW7 307 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 OR10C1Q96KK4 312 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 FNDC4Q9H6D8 234 aaPredicted RBP4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 DIABLOQ9NR28 239 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM14BQ9NUH8 114 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 COMMD9Q9P000 198 aa4.93□□□□□ -1.62
PRPF40B-214ENST00000551320 A0A0B4J293 547 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 GPR31O00270 319 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 C12orf74Q32Q52 190 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM69Q5SWH9 247 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 Q6ZRM9 215 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 H2BFWTQ7Z2G1 175 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 TPRA1Q86W33 373 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 STHQ8IWL8 128 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 OR1P1Q8NH06 330 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 TP53RKQ96S44 253 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 C6orf62Q9GZU0 229 aaPredicted RBP4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 C11orf68Q9H3H3 251 aaKnown RBP4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 VSIRQ9H7M9 311 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 XCL2Q9UBD3 114 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 PRNDQ9UKY0 176 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 BLOC1S6Q9UL45 172 aa4.92□□□□□ -1.62
PRPF40B-214ENST00000551320 IGHV3OR16-12A0A075B7B8 117 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 CYB5BO43169 146 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 MRPS14O60783 128 aaKnown RBP4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM50AO95807 157 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 RNASE2P10153 161 aaKnown RBP4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 PGAM2P15259 253 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 HTN3P15516 51 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 P2RY1P47900 373 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 GABARAPL2P60520 117 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 TSPAN5P62079 268 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 RELQ04864 619 aaPredicted RBP4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 MSMO1Q15800 293 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 PSMG4Q5JS54 123 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 GDF5OSQ5U4N7 250 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 TRPT1Q86TN4 253 aaKnown RBP4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 OR4D10Q8NGI6 311 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 OR6F1Q8NGZ6 308 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 TMEM56Q96MV1 263 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 CMTM3Q96MX0 182 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 SRSF8Q9BRL6 282 aaKnown RBP4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 AIFM2Q9BRQ8 373 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 C1orf43Q9BWL3 253 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 COMMD3Q9UBI1 195 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 ANAPC10Q9UM13 185 aa4.91□□□□□ -1.62
PRPF40B-214ENST00000551320 DEFB131BA0A096LNP1 70 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 K7EQG2 157 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 HPGDSO60760 199 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 SCGNO76038 276 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 ATP6V1G2O95670 118 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 IFNA17P01571 189 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 IGKV1-17P01599 117 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 NPPCP23582 126 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 PRSS3P35030 304 aa4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.63
PRPF40B-214ENST00000551320 HSPE1P61604 102 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms