RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 K7EQG2 157 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 IGKV1-17P01599 117 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 CD3DP04234 171 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 PIGPP57054 158 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 RND3P61587 244 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 TMEM187Q14656 261 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 TIGITQ495A1 244 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 GINS3Q9BRX5 216 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 X6R8D5 127 aa8.38□□□□□ -1.07
PRPF40B-212ENST00000551111 MUC4Q99102 2169 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 A0A087WXM4 84 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 IGLL5B9A064 214 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 INS-IGF2F8WCM5 200 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 IFNA17P01571 189 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 S100GP29377 79 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 SNCAP37840 140 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 NPBWR1P48145 328 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 STXBP6Q8NFX7 210 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 LHFPL5Q8TAF8 219 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 C2CD4CQ8TF44 421 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 DCANP1Q8TF63 244 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 ABHD1Q96SE0 405 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 SCRT1Q9BWW7 348 aa8.37□□□□□ -1.07
PRPF40B-212ENST00000551111 PKHD1P08F94 4074 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 C3orf85A0A1B0GTC6 90 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 CLN5O75503 358 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 IFNA4P05014 189 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 NPPCP23582 126 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 CRYBB3P26998 211 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 P2RY1P47900 373 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 AKR1C2P52895 323 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 FAAP20Q6NZ36 180 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 GSG1LQ6UXU4 331 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 ZNF767PQ75MW2 155 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 STHQ8IWL8 128 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 OR13C8Q8NGS7 320 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 TMEM170AQ8WVE7 144 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 MFFQ9GZY8 342 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 U3KQE9 123 aa8.36□□□□□ -1.07
PRPF40B-212ENST00000551111 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 FAM25AB3EWG3 89 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 FAM25CB3EWG5 89 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 FAM25GB3EWG6 89 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 NXPH3O95157 252 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 HLA-DMBP28068 263 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 OPRK1P41145 380 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 HOXA1P49639 335 aaPredicted RBP8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 Q6ZTC4 211 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 OR4X1Q8NH49 305 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 TMEM230Q96A57 120 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 MTFP1Q9UDX5 166 aa8.35□□□□□ -1.07
PRPF40B-212ENST00000551111 PKD1P98161 4303 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 ZNF705EA8MWA4 302 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 CD5P06127 495 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 UCP1P25874 307 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 DEFB1P60022 68 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 CTF1Q16619 201 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 TRIM16LQ309B1 348 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 GLYATL2Q8WU03 294 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 METTL26Q96S19 204 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 RTBDNQ9BSG5 229 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 MIXL1Q9H2W2 232 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 EXTL2Q9UBQ6 330 aa8.34□□□□□ -1.07
PRPF40B-212ENST00000551111 CD74P04233 296 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 IGLC1P0CG04 106 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 RPL5P46777 297 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 RORCP51449 518 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 RND2P52198 227 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 SUB1P53999 127 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 DHODHQ02127 395 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 MEF2DQ14814 521 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 SCGB2B2Q4G0G5 96 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 PRSS54Q6PEW0 395 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 SELENOHQ8IZQ5 122 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 ARRDC1Q8N5I2 433 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 TERB2Q8NHR7 220 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 GRAMD2BQ96HH9 432 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 RAB40CQ96S21 281 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms