RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 K7EIM0 57 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 UPK2O00526 184 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 CTDSP2O14595 271 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 PGLYRP1O75594 196 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 OR2J3O76001 311 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 TPPPO94811 219 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 IGKV1-5P01602 117 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 IGHV3-23P01764 117 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 APOA1P02647 267 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 PMP2P02689 132 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 CD74P04233 296 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 RLN1P04808 185 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 GP9P14770 177 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 HRH1P35367 487 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 ARL3P36405 182 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 SYNJ2BPP57105 145 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 RAB25P57735 213 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 EXOSC2Q13868 293 aaKnown RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 TNXAQ16473 311 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 ADAMTSL4-AS1Q5T5F5 129 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 PYHIN1Q6K0P9 492 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 FAAP20Q6NZ36 180 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 SSX9Q7RTT3 188 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 TMEM17Q86X19 198 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF502Q8TBZ5 544 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 TMEM230Q96A57 120 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 SEC22AQ96IW7 307 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 ADTRPQ96IZ2 230 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 HSD17B10Q99714 261 aaKnown RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 GINS4Q9BRT9 223 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 SLIRPQ9GZT3 109 aaKnown RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 NXF2Q9GZY0 626 aaKnown RBP3.59□□□□□ -1.83
SCAF11-214ENST00000550893 Q9H521 79 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 SIGLEC8Q9NYZ4 499 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 KLK11Q9UBX7 282 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 FBXL17Q9UF56 701 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 MLXQ9UH92 298 aa3.59□□□□□ -1.83
SCAF11-214ENST00000550893 RBMY1BA6NDE4 496 aaKnown RBP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 RBMY1EA6NEQ0 496 aaKnown RBP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 SCGNO76038 276 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR2A4O95047 310 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 CD7P09564 240 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 CTXN2P0C2S0 81 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 RBMY1DP0C7P1 496 aaKnown RBP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 RPA2P15927 270 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 PSMB6P28072 239 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 FXYD4P59646 89 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 PITPNAQ00169 270 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 EWSR1Q01844 656 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF79Q15937 498 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 RTL8BQ17RB0 113 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 C15orf32Q32M92 178 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 AARDQ4LEZ3 155 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 VAX1Q5SQQ9 334 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM69Q5SWH9 247 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 MMD2Q8IY49 270 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 SPAG16Q8N0X2 631 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR9G4Q8NGQ1 327 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR13C8Q8NGS7 320 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR51H1Q8NH63 302 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR4S2Q8NH73 311 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 TCTEX1D2Q8WW35 142 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 OR2A7Q96R45 310 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 SRSF8Q9BRL6 282 aaKnown RBP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 CHRDL1Q9BU40 450 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
SCAF11-214ENST00000550893 GON7Q9BXV9 100 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 SLC5A7Q9GZV3 580 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 RETNQ9HD89 108 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 SLC2A9Q9NRM0 540 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 NDUFA4L2Q9NRX3 87 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 TMEM14BQ9NUH8 114 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 EHFQ9NZC4 300 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 COMMD9Q9P000 198 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 ZNF257Q9Y2Q1 563 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 NSG2Q9Y328 171 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 V9GYH0 126 aa3.58□□□□□ -1.84
SCAF11-214ENST00000550893 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 IGLV9-49A0A0B4J1Y8 123 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 TEX50A0A1B0GTY4 177 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 C2orf70A6NJV1 201 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 C15orf61A6NNL5 157 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 H3BMQ9 156 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 I3L2K1 104 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 SAP30O75446 220 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 CD3DP04234 171 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 C8orf88P0DMB2 117 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 RRASP10301 218 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 HLA-GP17693 338 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 F2RP25116 425 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 HLA-DMAP28067 261 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 G6PCP35575 357 aa3.57□□□□□ -1.84
SCAF11-214ENST00000550893 RPL27AP46776 148 aaKnown RBP3.57□□□□□ -1.84
SCAF11-214ENST00000550893 INSL3P51460 131 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms