RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 BSCL2Q96G97 398 aaPredicted RBP16.51■□□□□ 0.23
NEK3-202ENST00000550841 RCL1Q9Y2P8 373 aaKnown RBP16.51■□□□□ 0.23
NEK3-202ENST00000550841 WNK1Q9H4A3 2382 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 C15orf62A8K5M9 175 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 HOXD3P31249 432 aaPredicted RBP16.5■□□□□ 0.23
NEK3-202ENST00000550841 H2BFSP57053 126 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 S100A10P60903 97 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 RAB32Q13637 225 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 UBAC2Q8NBM4 344 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 CACNG8Q8WXS5 425 aa16.5■□□□□ 0.23
NEK3-202ENST00000550841 BMPR1BO00238 502 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 GNG7O60262 68 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 TRBV12-3P01733 135 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 GPR183P32249 361 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 PAX9P55771 341 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 OR4X1Q8NH49 305 aa16.49■□□□□ 0.23
NEK3-202ENST00000550841 MCRIP2Q9BUT9 160 aaKnown RBP16.49■□□□□ 0.23
NEK3-202ENST00000550841 FNDC4Q9H6D8 234 aaPredicted RBP16.49■□□□□ 0.23
NEK3-202ENST00000550841 OR2T8A6NH00 312 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 PPP5D1E7EU14 171 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 NUPL2O15504 423 aaKnown RBP16.48■□□□□ 0.23
NEK3-202ENST00000550841 TGOLN2O43493 480 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 SLURP1P55000 103 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 RRAS2P62070 204 aaPredicted RBP16.48■□□□□ 0.23
NEK3-202ENST00000550841 CD69Q07108 199 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 FCN2Q15485 313 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 FAM106AQ4KMX7 169 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 OR4C12Q96R67 309 aa16.48■□□□□ 0.23
NEK3-202ENST00000550841 TRAV30A0A087WSZ9 112 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 H3BP45 60 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 SCAF4O95104 1147 aaKnown RBP16.47■□□□□ 0.23
NEK3-202ENST00000550841 TMEM50AO95807 157 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 IGHV3-48P01763 117 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 PET100P0DJ07 73 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 BCAP31P51572 246 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 KLF5Q13887 457 aaPredicted RBP16.47■□□□□ 0.23
NEK3-202ENST00000550841 MLANAQ16655 118 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 GPHB5Q86YW7 130 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 ASB13Q8WXK3 278 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 DCUN1D4Q92564 292 aa16.47■□□□□ 0.23
NEK3-202ENST00000550841 DLX4Q92988 240 aaPredicted RBP16.47■□□□□ 0.23
NEK3-202ENST00000550841 OVOL1O14753 267 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 CLN5O75503 358 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 OR2C1O95371 312 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 TMEM14EPQ6UXP3 125 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 SLC16A13Q7RTY0 426 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 C1QL4Q86Z23 238 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 TMEM116Q8NCL8 245 aa16.46■□□□□ 0.23
NEK3-202ENST00000550841 RCC1LQ96I51 464 aaKnown RBP16.46■□□□□ 0.23
NEK3-202ENST00000550841 E5RGE8 158 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 F8W735 103 aaPredicted RBP16.45■□□□□ 0.22
NEK3-202ENST00000550841 DEDDO75618 318 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 CTSGP08311 255 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 CXCL3P19876 107 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 RELQ04864 619 aaPredicted RBP16.45■□□□□ 0.22
NEK3-202ENST00000550841 PRSS54Q6PEW0 395 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 OR10P1Q8NGE3 313 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 PPP1R1CQ8WVI7 109 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 SLC35E1Q96K37 410 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 GPR61Q9BZJ8 451 aa16.45■□□□□ 0.22
NEK3-202ENST00000550841 CAV2P51636 162 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 SYNJ2BPP57105 145 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 LRRC37A5PQ49AS3 106 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 ELOVL1Q9BW60 279 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 ZNF436Q9C0F3 470 aaPredicted RBP16.44■□□□□ 0.22
NEK3-202ENST00000550841 C11orf1Q9H5F2 150 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 ZC4H2Q9NQZ6 224 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 PEMTQ9UBM1 199 aa16.44■□□□□ 0.22
NEK3-202ENST00000550841 LGALS9O00182 355 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 METTL15P1P0C7V9 234 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 RND2P52198 227 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 DEFA6Q01524 100 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 NPIPB3Q92617 1050 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 CHRDL1Q9BU40 450 aa16.43■□□□□ 0.22
NEK3-202ENST00000550841 LYRM2Q9NU23 88 aaPredicted RBP16.43■□□□□ 0.22
NEK3-202ENST00000550841 NDUFA4O00483 81 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 MPC2O95563 127 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 GIPP09681 153 aaPredicted RBP16.42■□□□□ 0.22
NEK3-202ENST00000550841 GAMTQ14353 236 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 OR8G2PQ6IF36 304 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 OR9G4Q8NGQ1 327 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 OR1S2Q8NGQ3 325 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 ACY3Q96HD9 319 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 SLC25A31Q9H0C2 315 aa16.42■□□□□ 0.22
NEK3-202ENST00000550841 ZNF320A2RRD8 509 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 FAM24AA6NFZ4 105 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 PMS2P5A8MQ11 134 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 PRSS46E5RG02 174 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 ADMP35318 185 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 P2RY1P47900 373 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 FGL1Q08830 312 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 REC114Q7Z4M0 266 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 GGACTQ9BVM4 153 aa16.41■□□□□ 0.22
NEK3-202ENST00000550841 MRPL36Q9P0J6 103 aaKnown RBP16.41■□□□□ 0.22
NEK3-202ENST00000550841 FNDC10F2Z333 226 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 OR10J1P30954 320 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 INSL3P51460 131 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 RAP2BP61225 183 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 DLK1P80370 383 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms