RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 ENY2Q9NPA8 101 aa10.6□□□□□ -0.71
COL2A1-209ENST00000546974 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL2A1-209ENST00000546974 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 A0A0G2JRQ6 117 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 TEX13DA0A0J9YY54 714 aaPredicted RBP10.59□□□□□ -0.71
COL2A1-209ENST00000546974 CTDSP2O14595 271 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 RGS5O15539 181 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 CLN5O75503 358 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 CDS2O95674 445 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
COL2A1-209ENST00000546974 ALDH3B2P48448 385 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 PMS2P11Q13670 270 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 AARDQ4LEZ3 155 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 Q6ZRM9 215 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 GPR141Q7Z602 305 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 LILRB2Q8N423 598 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 TMEM217Q8N7C4 229 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 RNASE11Q8TAA1 199 aaKnown RBP10.59□□□□□ -0.71
COL2A1-209ENST00000546974 RTBDNQ9BSG5 229 aaPredicted RBP10.59□□□□□ -0.71
COL2A1-209ENST00000546974 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
COL2A1-209ENST00000546974 C14orf166Q9Y224 244 aaKnown RBP10.59□□□□□ -0.71
COL2A1-209ENST00000546974 A0A1B0GU03 582 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 MPTX1A8MV57 137 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 DISC1C4P0D8 188 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 DNASE2O00115 360 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 DFFBO76075 338 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 OR5AC1P0C628 307 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 SPCS3P61009 180 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 DHODHQ02127 395 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 BSXQ3C1V8 233 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 GLYATL2Q8WU03 294 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 SMIM4Q8WVI0 70 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 MS4A6AQ9H2W1 248 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 NAA60Q9H7X0 242 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-209ENST00000546974 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 VPS13DQ5THJ4 4388 aa10.58□□□□□ -0.72
COL2A1-209ENST00000546974 DNAH10Q8IVF4 4471 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 A0A1W2PS18 150 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 CTDSPLO15194 276 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 SCGB2A1O75556 95 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 NPPCP23582 126 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 OPRK1P41145 380 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 SPCS2Q15005 226 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 MLANAQ16655 118 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 FAAP20Q6NZ36 180 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 RBPMSQ93062 196 aaKnown RBP10.57□□□□□ -0.72
COL2A1-209ENST00000546974 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
COL2A1-209ENST00000546974 GPR132Q9UNW8 380 aa10.57□□□□□ -0.72
COL2A1-209ENST00000546974 AGRNO00468 2067 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 TRAV30A0A087WSZ9 112 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 IGHV3-66A0A0C4DH42 116 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 CRYBB3P26998 211 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 HTR2BP41595 481 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
COL2A1-209ENST00000546974 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
COL2A1-209ENST00000546974 OR4C16Q8NGL9 310 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 LHFPL5Q8TAF8 219 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 TMEM230Q96A57 120 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 METTL26Q96S19 204 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 RARRES2Q99969 163 aa10.56□□□□□ -0.72
COL2A1-209ENST00000546974 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
COL2A1-209ENST00000546974 RPS10-NUDT3A0A1W2PQS6 291 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 DEFB131AP59861 70 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 IL18Q14116 193 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 CLVS1Q8IUQ0 354 aaPredicted RBP10.55□□□□□ -0.72
COL2A1-209ENST00000546974 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 GPR146Q96CH1 333 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 DIRAS2Q96HU8 199 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 PRRT1Q99946 306 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 BCL7BQ9BQE9 202 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
COL2A1-209ENST00000546974 CACNG5Q9UF02 275 aa10.55□□□□□ -0.72
COL2A1-209ENST00000546974 LY6G6CO95867 125 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 IGKV1-17P01599 117 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 TIGITQ495A1 244 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 TMEM268Q5VZI3 342 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 NARS2Q96I59 477 aaKnown RBP10.54□□□□□ -0.72
COL2A1-209ENST00000546974 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
COL2A1-209ENST00000546974 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
COL2A1-209ENST00000546974 ANKRD20A5PA0PJZ0 165 aa10.53□□□□□ -0.72
COL2A1-209ENST00000546974 GSTZ1O43708 216 aaPredicted RBP10.53□□□□□ -0.72
COL2A1-209ENST00000546974 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms