RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 Q56UQ5 140 aa15.91■□□□□ 0.14
SCARB1-211ENST00000546215 MRPL36Q9P0J6 103 aaKnown RBP15.91■□□□□ 0.14
SCARB1-211ENST00000546215 CTSGP08311 255 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 RPP30P78346 268 aaKnown RBP15.9■□□□□ 0.14
SCARB1-211ENST00000546215 OXLD1Q5BKU9 147 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 SPSB3Q6PJ21 355 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 SMIM8Q96KF7 97 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 OR4C12Q96R67 309 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 CHRDL1Q9BU40 450 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 MCRIP2Q9BUT9 160 aaKnown RBP15.9■□□□□ 0.14
SCARB1-211ENST00000546215 GAR1Q9NY12 217 aaKnown RBP15.9■□□□□ 0.14
SCARB1-211ENST00000546215 NOTCH1P46531 2555 aa15.9■□□□□ 0.14
SCARB1-211ENST00000546215 IFNA4P05014 189 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 ADMP35318 185 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 SPANXN5Q5MJ07 72 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 ACSM6Q6P461 480 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 GPHB5Q86YW7 130 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 RAB40CQ96S21 281 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 DNAH3Q8TD57 4116 aa15.89■□□□□ 0.13
SCARB1-211ENST00000546215 RPS10-NUDT3A0A1W2PQS6 291 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 G3V4G9 280 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 H3BP45 60 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 K7EPK0 472 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 NPBWR1P48145 328 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 H2BFSP57053 126 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 RAB11AP62491 216 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 SAMD5Q5TGI4 173 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 C1QL4Q86Z23 238 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 OR4X1Q8NH49 305 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 PSENENQ9NZ42 101 aa15.88■□□□□ 0.13
SCARB1-211ENST00000546215 TAS2R30P59541 319 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 CD69Q07108 199 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 PRSS54Q6PEW0 395 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 NMES1Q9C002 83 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 STRAPQ9Y3F4 350 aaKnown RBP15.87■□□□□ 0.13
SCARB1-211ENST00000546215 LSM5Q9Y4Y9 91 aaKnown RBP15.87■□□□□ 0.13
SCARB1-211ENST00000546215 IGHV3-35A0A0C4DH35 117 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 SEC14L6B5MCN3 397 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 GNG7O60262 68 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 SLC25A4P12235 298 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 RAB32Q13637 225 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 ETFRF1Q6IPR1 90 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 OR9G4Q8NGQ1 327 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 ZNF414Q96IQ9 312 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 C11orf1Q9H5F2 150 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 MGAT4CQ9UBM8 478 aa15.87■□□□□ 0.13
SCARB1-211ENST00000546215 PAIP2BQ9ULR5 123 aaKnown RBP15.87■□□□□ 0.13
SCARB1-211ENST00000546215 LGALS9O00182 355 aa15.86■□□□□ 0.13
SCARB1-211ENST00000546215 NUPL2O15504 423 aaKnown RBP15.86■□□□□ 0.13
SCARB1-211ENST00000546215 CLN5O75503 358 aa15.86■□□□□ 0.13
SCARB1-211ENST00000546215 GPX4P36969 197 aaPredicted RBP15.86■□□□□ 0.13
SCARB1-211ENST00000546215 FAM106AQ4KMX7 169 aa15.86■□□□□ 0.13
SCARB1-211ENST00000546215 IL34Q6ZMJ4 242 aa15.86■□□□□ 0.13
SCARB1-211ENST00000546215 TMEM116Q8NCL8 245 aa15.86■□□□□ 0.13
SCARB1-211ENST00000546215 ZNF436Q9C0F3 470 aaPredicted RBP15.86■□□□□ 0.13
SCARB1-211ENST00000546215 PRSS46E5RG02 174 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 TSC22D2O75157 780 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 TMEM14EPQ6UXP3 125 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 SLC16A13Q7RTY0 426 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 REC114Q7Z4M0 266 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 CACNG8Q8WXS5 425 aa15.85■□□□□ 0.13
SCARB1-211ENST00000546215 WDR89Q96FK6 387 aaPredicted RBP15.85■□□□□ 0.13
SCARB1-211ENST00000546215 WIPF1O43516 503 aa15.84■□□□□ 0.13
SCARB1-211ENST00000546215 RND2P52198 227 aa15.84■□□□□ 0.13
SCARB1-211ENST00000546215 S100A10P60903 97 aa15.84■□□□□ 0.13
SCARB1-211ENST00000546215 CYCSP99999 105 aaKnown RBP15.84■□□□□ 0.13
SCARB1-211ENST00000546215 C9orf66Q5T8R8 295 aa15.84■□□□□ 0.13
SCARB1-211ENST00000546215 UNQ9165/PRO28630Q6UXU0 137 aa15.84■□□□□ 0.13
SCARB1-211ENST00000546215 PMS2P5A8MQ11 134 aa15.83■□□□□ 0.13
SCARB1-211ENST00000546215 CXCL3P19876 107 aa15.83■□□□□ 0.13
SCARB1-211ENST00000546215 ELOVL1Q9BW60 279 aa15.83■□□□□ 0.13
SCARB1-211ENST00000546215 GPR61Q9BZJ8 451 aa15.83■□□□□ 0.13
SCARB1-211ENST00000546215 MED28Q9H204 178 aa15.83■□□□□ 0.13
SCARB1-211ENST00000546215 ZNF320A2RRD8 509 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 L7N2F9 121 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 NDUFA4O00483 81 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 CSN3P07498 182 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 INSL3P51460 131 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 VAMP2P63027 116 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 RELQ04864 619 aaPredicted RBP15.83■□□□□ 0.12
SCARB1-211ENST00000546215 GAMTQ14353 236 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 NPIPB3Q92617 1050 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 PEMTQ9UBM1 199 aa15.83■□□□□ 0.12
SCARB1-211ENST00000546215 SAP30O75446 220 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 IGKV1-17P01599 117 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 METTL15P1P0C7V9 234 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 FCN2Q15485 313 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 TMEM190Q8WZ59 177 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 ACY3Q96HD9 319 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 FBN3Q75N90 2809 aa15.82■□□□□ 0.12
SCARB1-211ENST00000546215 TRAV30A0A087WSZ9 112 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 A8MWP6 167 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 DEDDO75618 318 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 CCNKO75909 580 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 IGLC1P0CG04 106 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 PVALBP20472 110 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-211ENST00000546215 BEAN1Q3B7T3 259 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 KPRPQ5T749 579 aaPredicted RBP15.81■□□□□ 0.12
SCARB1-211ENST00000546215 OR11H7Q8NGC8 314 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 PPP1R1CQ8WVI7 109 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms