RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 AKIRIN2Q53H80 203 aa15.31■□□□□ 0.04
SKP2-208ENST00000546211 IL34Q6ZMJ4 242 aa15.31■□□□□ 0.04
SKP2-208ENST00000546211 LYPD6BQ8NI32 183 aa15.31■□□□□ 0.04
SKP2-208ENST00000546211 ZNF48Q96MX3 618 aaPredicted RBP15.31■□□□□ 0.04
SKP2-208ENST00000546211 NAV3Q8IVL0 2385 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 IGLV11-55A0A075B6I3 123 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 IGHV3-21A0A0B4J1V1 117 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 LINC01548A6NM66 108 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 IL17RELQ6ZVW7 336 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 SLC35E3Q7Z769 313 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 STPG3Q8N7X2 389 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 THAP8Q8NA92 274 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 TMEM116Q8NCL8 245 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 PRDM13Q9H4Q3 707 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 MRPL36Q9P0J6 103 aaKnown RBP15.3■□□□□ 0.04
SKP2-208ENST00000546211 SLC45A2Q9UMX9 530 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 HECTD1Q9ULT8 2610 aa15.3■□□□□ 0.04
SKP2-208ENST00000546211 MFSD2BA6NFX1 497 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 ZFP92A6NM28 416 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 HBE1P02100 147 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
SKP2-208ENST00000546211 SFT2D1Q8WV19 159 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
SKP2-208ENST00000546211 FANCD2OSQ96PS1 177 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 TNFRSF19Q9NS68 423 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 SLC39A9Q9NUM3 307 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 VPREB3Q9UKI3 123 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 ABCA1O95477 2261 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 ITPR3Q14573 2671 aa15.29■□□□□ 0.04
SKP2-208ENST00000546211 RAB19A4D1S5 217 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 K7EIM0 57 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 IGHG2P01859 326 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 HNF1AP20823 631 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 S100A1P23297 94 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 CRIP2P52943 208 aaPredicted RBP15.28■□□□□ 0.04
SKP2-208ENST00000546211 PRR20EP86478 221 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 PRR20CP86479 221 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 PRR20DP86480 221 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 PRR20BP86481 221 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 PRR20AP86496 221 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 CYP2G1PQ6ZSU1 146 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 RPP25LQ8N5L8 163 aaKnown RBP15.28■□□□□ 0.04
SKP2-208ENST00000546211 COMMD1Q8N668 190 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 BPIFCQ8NFQ6 507 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 ACTR3CQ9C0K3 210 aaPredicted RBP15.28■□□□□ 0.04
SKP2-208ENST00000546211 TRAV41A0A0B4J266 112 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 TCRBV4S1A1TA0A5B7 111 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 YIF1AO95070 293 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 FAM122CQ6P4D5 195 aa15.28■□□□□ 0.04
SKP2-208ENST00000546211 EIF4E3Q8N5X7 224 aaKnown RBP15.28■□□□□ 0.04
SKP2-208ENST00000546211 ITPR2Q14571 2701 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 CTXND1A0A1B0GTU2 59 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 A0A1B0GV50 99 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 G3V318 75 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 HOXA3O43365 443 aaPredicted RBP15.27■□□□□ 0.03
SKP2-208ENST00000546211 IGF1P05019 195 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 SELENOTP62341 195 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 BLCAPP62952 87 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 ZNF726P1Q15940 193 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 OR4X1Q8NH49 305 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 MBD3L1Q8WWY6 194 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 ZNF355PQ9NSJ1 428 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 CCDC168Q8NDH2 2452 aa15.27■□□□□ 0.03
SKP2-208ENST00000546211 IGKV1D-37A0A075B6S9 117 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 A0A1W2PPV4 95 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 LINC00869P0C866 280 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 CDC34P49427 236 aaPredicted RBP15.26■□□□□ 0.03
SKP2-208ENST00000546211 GCSAMLQ5JQS6 135 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 LCN15Q6UWW0 184 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 TRGV9Q99603 122 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
SKP2-208ENST00000546211 TRAV1-1A0A0B4J248 108 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 MAP1LC3B2A6NCE7 125 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 OR2J3O76001 311 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 SPSB3Q6PJ21 355 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 SIGLECL1Q8N7X8 197 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 MAP1LC3BQ9GZQ8 125 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 FBXL7Q9UJT9 491 aa15.25■□□□□ 0.03
SKP2-208ENST00000546211 SEC14L6B5MCN3 397 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 AP4M1O00189 453 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 CLN5O75503 358 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 NDUFB8O95169 186 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 GATA2P23769 480 aaPredicted RBP15.24■□□□□ 0.03
SKP2-208ENST00000546211 NPBWR1P48145 328 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 MFAP4P55083 255 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 KLK9Q2XQG4 91 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 C19orf54Q5BKX5 351 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 UQCC3Q6UW78 93 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 SSX7Q7RTT5 188 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 KLK9Q9UKQ9 250 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 I3L521 148 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 ZNF90Q03938 601 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 RBMS3Q6XE24 437 aaKnown RBP15.24■□□□□ 0.03
SKP2-208ENST00000546211 RAB24Q969Q5 203 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 LINC00527Q9UJ94 153 aa15.24■□□□□ 0.03
SKP2-208ENST00000546211 CELSR1Q9NYQ6 3014 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 CSPG4Q6UVK1 2322 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 IGLC1P0CG04 106 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 RHOBP62745 196 aa15.23■□□□□ 0.03
SKP2-208ENST00000546211 PBDC1Q9BVG4 233 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms