RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TMEM222Q9H0R3 208 aa12□□□□□ -0.49
DDX55-212ENST00000544738 TEX13DA0A0J9YY54 714 aaPredicted RBP11.99□□□□□ -0.49
DDX55-212ENST00000544738 CTDSPLO15194 276 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 SPRY2O43597 315 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 SCGB2A1O75556 95 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 CDS2O95674 445 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 AKAIN1P0CW23 69 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 ETV6P41212 452 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 TMBIM6P55061 237 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 PVRIGQ6DKI7 326 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 ZNF600Q6ZNG1 722 aa11.99□□□□□ -0.49
DDX55-212ENST00000544738 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
DDX55-212ENST00000544738 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
DDX55-212ENST00000544738 KLK5Q9Y337 293 aaPredicted RBP11.99□□□□□ -0.49
DDX55-212ENST00000544738 TMEM50AO95807 157 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 RNASE2P10153 161 aaKnown RBP11.98□□□□□ -0.49
DDX55-212ENST00000544738 RPL5P46777 297 aaKnown RBP11.98□□□□□ -0.49
DDX55-212ENST00000544738 SPCS3P61009 180 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 DHODHQ02127 395 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 IL18Q14116 193 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 TOMM20LQ6UXN7 152 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 OR52E5Q8NH55 327 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 GLYATL2Q8WU03 294 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 RBPMSQ93062 196 aaKnown RBP11.98□□□□□ -0.49
DDX55-212ENST00000544738 PRRT1Q99946 306 aa11.98□□□□□ -0.49
DDX55-212ENST00000544738 RTBDNQ9BSG5 229 aaPredicted RBP11.98□□□□□ -0.49
DDX55-212ENST00000544738 CCDC59Q9P031 241 aaKnown RBP11.98□□□□□ -0.49
DDX55-212ENST00000544738 IGHV3-49A0A0A0MS15 119 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 OR5AC1P0C628 307 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 TNFRSF9Q07011 255 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 AARDQ4LEZ3 155 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 FAAP20Q6NZ36 180 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 DYNC2LI1Q8TCX1 351 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 NAA60Q9H7X0 242 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 CACFD1Q9UGQ2 172 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 GPR132Q9UNW8 380 aa11.97□□□□□ -0.49
DDX55-212ENST00000544738 PUS1Q9Y606 427 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX55-212ENST00000544738 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 A0A0G2JRQ6 117 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 A0A0J9YWU9 116 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 CLN5O75503 358 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 OPRK1P41145 380 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 HTR2BP41595 481 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 TFPI2P48307 235 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 EWSR1Q01844 656 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDX55-212ENST00000544738 DEFB135Q30KP9 77 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 Q6ZRM9 215 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 OR4C16Q8NGL9 310 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 RNF183Q96D59 192 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 VSIRQ9H7M9 311 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 RSL24D1Q9UHA3 163 aaKnown RBP11.96□□□□□ -0.49
DDX55-212ENST00000544738 KCNIP3Q9Y2W7 256 aa11.96□□□□□ -0.49
DDX55-212ENST00000544738 MUC4Q99102 2169 aa11.96□□□□□ -0.5
DDX55-212ENST00000544738 PKHD1P08F94 4074 aa11.96□□□□□ -0.5
DDX55-212ENST00000544738 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 TRAV30A0A087WSZ9 112 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 RPS10-NUDT3A0A1W2PQS6 291 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 A0A1W2PS18 150 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 GSTZ1O43708 216 aaPredicted RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 NOL3O60936 208 aaKnown RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 NPPCP23582 126 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 APRG1Q8IVJ8 170 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 SELENOHQ8IZQ5 122 aaKnown RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 OR4X1Q8NH49 305 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 HEYLQ9NQ87 328 aaPredicted RBP11.95□□□□□ -0.5
DDX55-212ENST00000544738 SCP2D1Q9UJQ7 156 aa11.95□□□□□ -0.5
DDX55-212ENST00000544738 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 ANKRD20A5PA0PJZ0 165 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 DNASE2O00115 360 aaPredicted RBP11.94□□□□□ -0.5
DDX55-212ENST00000544738 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
DDX55-212ENST00000544738 TMEM268Q5VZI3 342 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 TMEM217Q8N7C4 229 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 OR51S1Q8NGJ8 323 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 LHFPL5Q8TAF8 219 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 ST8SIA2Q92186 375 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 CSTL1Q9H114 145 aa11.94□□□□□ -0.5
DDX55-212ENST00000544738 A0A1B0GU03 582 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 MPTX1A8MV57 137 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 DFFBO76075 338 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
DDX55-212ENST00000544738 C2orf83Q53S99 150 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 GPR146Q96CH1 333 aa11.93□□□□□ -0.5
DDX55-212ENST00000544738 NARS2Q96I59 477 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms