RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 B4DSR2 109 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 E7EUB6 86 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 SAA4P35542 130 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 RPL27AP46776 148 aaKnown RBP7.46□□□□□ -1.22
GNE-206ENST00000543356 C10orf55Q5SWW7 151 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 FAM213BQ8TBF2 198 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 ACTL6BO94805 426 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 GZMBP10144 247 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 GATA3P23771 443 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 SNCAP37840 140 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 RPS10P46783 165 aaKnown RBP7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 WT1-ASQ06250 92 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 MMDQ15546 238 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 TNXAQ16473 311 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
GNE-206ENST00000543356 COMMD1Q8N668 190 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 ZNF114Q8NC26 417 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 MBD6Q96DN6 1003 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 SRSF8Q9BRL6 282 aaKnown RBP7.45□□□□□ -1.22
GNE-206ENST00000543356 NPCDR1Q9BY65 106 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 HRH4Q9H3N8 390 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 FBXL15Q9H469 300 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 KIAA1456Q9P272 454 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 IGHV1-69DA0A0B4J2H0 117 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 TMEM238C9JI98 176 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 C17orf112F2Z3M2 114 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 IGHV1-69P01742 117 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 RPLP1P05386 114 aaKnown RBP7.45□□□□□ -1.22
GNE-206ENST00000543356 FHITP49789 147 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 SUB1P53999 127 aaKnown RBP eCLIP7.45□□□□□ -1.22
GNE-206ENST00000543356 ZNF616Q08AN1 781 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 PVRIGQ6DKI7 326 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
GNE-206ENST00000543356 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
GNE-206ENST00000543356 ABCA2Q9BZC7 2435 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 PPP1R2P9O14990 202 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 CD5P06127 495 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 PF4V1P10720 104 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 BRS3P32247 399 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 SSBP2P81877 361 aaPredicted RBP7.44□□□□□ -1.22
GNE-206ENST00000543356 LOXL1Q08397 574 aaPredicted RBP7.44□□□□□ -1.22
GNE-206ENST00000543356 HES1Q14469 280 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 PLGLAQ15195 96 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 RNASEH2CQ8TDP1 164 aaKnown RBP7.44□□□□□ -1.22
GNE-206ENST00000543356 PACRGQ96M98 296 aaPredicted RBP7.44□□□□□ -1.22
GNE-206ENST00000543356 NPVFQ9HCQ7 196 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 FBN2P35556 2912 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 TEX22C9J3V5 150 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 AGPAT2O15120 278 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 TSPAN15O95858 294 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 PIP4P2Q8N4L2 257 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 ZNF709Q8N972 641 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 LINC01356Q8N9X3 169 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 LFNGQ8NES3 379 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 KCNIP2Q9NS61 270 aa7.44□□□□□ -1.22
GNE-206ENST00000543356 LSM4Q9Y4Z0 139 aaKnown RBP7.44□□□□□ -1.22
GNE-206ENST00000543356 SMCO3A2RU48 225 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 FAM106CPP0CH98 169 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 OR13C7P0DN81 318 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 GNB1P62873 340 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
GNE-206ENST00000543356 C5orf64Q2M2E5 130 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 FBLN7Q53RD9 439 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
GNE-206ENST00000543356 P2RX4Q99571 388 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 HIST1H2BLQ99880 126 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
GNE-206ENST00000543356 DNAJC4Q9NNZ3 241 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 RPRMQ9NS64 109 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 FAM208BQ5VWN6 2430 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 CHD6Q8TD26 2715 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 TRAV40A0A0B4J280 105 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 M0QZK8 103 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 M0R036 132 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 CD24P25063 80 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 BMI1P35226 326 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 TAGLN2P37802 199 aaKnown RBP7.43□□□□□ -1.22
GNE-206ENST00000543356 OPRK1P41145 380 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 CD69Q07108 199 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 PRSS57Q6UWY2 283 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 CACNG8Q8WXS5 425 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms