RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GPR61Q9BZJ8 451 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 ZC4H2Q9NQZ6 224 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 G3V4G9 280 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 SSNA1O43805 119 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 SSSCA1O60232 199 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 IFNA4P05014 189 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 NPBWR1P48145 328 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 RAB11AP62491 216 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 IL15RAQ13261 267 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 OXA1LQ15070 435 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 ALG5Q9Y673 324 aa13.09□□□□□ -0.31
RABGGTA-203ENST00000543002 SEC14L6B5MCN3 397 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 GNG7O60262 68 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 SIX6O95475 246 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 TMEM50AO95807 157 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 CTSGP08311 255 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 SLC25A4P12235 298 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 ADMP35318 185 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 PAX9P55771 341 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 CD69Q07108 199 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 C9orf66Q5T8R8 295 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 ETFRF1Q6IPR1 90 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 OR4X1Q8NH49 305 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 OR4C12Q96R67 309 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 CHRDL1Q9BU40 450 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.32
RABGGTA-203ENST00000543002 K7EPK0 472 aa13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 LGALS9O00182 355 aa13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 NUPL2O15504 423 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 TAS2R30P59541 319 aa13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 REC114Q7Z4M0 266 aa13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 ELOVL1Q9BW60 279 aa13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 ZNF436Q9C0F3 470 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-203ENST00000543002 H3BP45 60 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 WIPF1O43516 503 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 CLN5O75503 358 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 GPX4P36969 197 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 INSL3P51460 131 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 TMEM116Q8NCL8 245 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 NMES1Q9C002 83 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 LSM5Q9Y4Y9 91 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-203ENST00000543002 CMYA5Q8N3K9 4069 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 TSC22D2O75157 780 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 CYCSP99999 105 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 RELQ04864 619 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 RAB32Q13637 225 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
RABGGTA-203ENST00000543002 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 ZNF320A2RRD8 509 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 PRSS46E5RG02 174 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 L7N2F9 121 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 NDUFA4O00483 81 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 SAP30O75446 220 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 CSN3P07498 182 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 RND2P52198 227 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 H2BFSP57053 126 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 S100A10P60903 97 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 VAMP2P63027 116 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 TMEM14EPQ6UXP3 125 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 ZNF414Q96IQ9 312 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 C11orf1Q9H5F2 150 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 NOTCH1P46531 2555 aa13.04□□□□□ -0.32
RABGGTA-203ENST00000543002 A8MWP6 167 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 PVALBP20472 110 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 TMEM190Q8WZ59 177 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 NPIPB3Q92617 1050 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 SLC35E1Q96K37 410 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 MED28Q9H204 178 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 SIGLEC8Q9NYZ4 499 aa13.03□□□□□ -0.32
RABGGTA-203ENST00000543002 PMS2P5A8MQ11 134 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 IGLC1P0CG04 106 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 GAMTQ14353 236 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 ACY3Q96HD9 319 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 FBN3Q75N90 2809 aa13.02□□□□□ -0.33
RABGGTA-203ENST00000543002 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
RABGGTA-203ENST00000543002 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
RABGGTA-203ENST00000543002 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms