RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 ACY3Q96HD9 319 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 LINC00052Q96N35 136 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 TXN2Q99757 166 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 RASL11BQ9BPW5 248 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 F11RQ9Y624 299 aaKnown RBP8.73□□□□□ -1.01
SCG3-202ENST00000542355 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 CELSR1Q9NYQ6 3014 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 DEFA4P12838 97 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 GCSAMLQ5JQS6 135 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 UQCC3Q6UW78 93 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 TMEM219Q86XT9 240 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 PIFOQ8TCI5 191 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 ARPC1AQ92747 370 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 SLC35E1Q96K37 410 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 SSX3Q99909 188 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 SRSF8Q9BRL6 282 aaKnown RBP8.73□□□□□ -1.01
SCG3-202ENST00000542355 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 PXMP4Q9Y6I8 212 aa8.73□□□□□ -1.01
SCG3-202ENST00000542355 IGHV3-21A0A0B4J1V1 117 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 PLXNB1O43157 2135 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 M6PRP20645 277 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 NDPQ00604 133 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 ACOT6Q3I5F7 207 aaPredicted RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 SLC25A33Q9BSK2 321 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 SLC39A9Q9NUM3 307 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 ABCA12Q86UK0 2595 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 IGHV7-81A0A0B4J1V7 117 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 KRBOX1C9JBD0 128 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 J3QLI3 93 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 CTRB1P17538 263 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 FGF8P55075 233 aaPredicted RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 B2MP61769 119 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 CTRB2Q6GPI1 263 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 FAM122CQ6P4D5 195 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 COMMD1Q8N668 190 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 WFDC11Q8NEX6 87 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 SLC25A22Q9H936 323 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 MRPL36Q9P0J6 103 aaKnown RBP8.72□□□□□ -1.01
SCG3-202ENST00000542355 NAV2Q8IVL1 2488 aa8.72□□□□□ -1.01
SCG3-202ENST00000542355 APCP25054 2843 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 SH2D7A6NKC9 451 aaPredicted RBP8.71□□□□□ -1.01
SCG3-202ENST00000542355 CORTO00230 105 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 CYB5BO43169 146 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 YIF1AO95070 293 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 HBE1P02100 147 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 FBP1P09467 338 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 GATA2P23769 480 aaPredicted RBP8.71□□□□□ -1.01
SCG3-202ENST00000542355 OR10J1P30954 320 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 RPL29P47914 159 aaKnown RBP8.71□□□□□ -1.01
SCG3-202ENST00000542355 GUK1Q16774 197 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 ETFRF1Q6IPR1 90 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 STPG3Q8N7X2 389 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 LFNGQ8NES3 379 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 MBD3L1Q8WWY6 194 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 C22orf15Q8WYQ4 148 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 FANCD2OSQ96PS1 177 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 HSPB9Q9BQS6 159 aa8.71□□□□□ -1.01
SCG3-202ENST00000542355 ACTR3CQ9C0K3 210 aaPredicted RBP8.71□□□□□ -1.01
SCG3-202ENST00000542355 HELZ2Q9BYK8 2649 aaKnown RBP8.71□□□□□ -1.02
SCG3-202ENST00000542355 TMEM218A2RU14 115 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 BTBD17A6NE02 478 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 C9JQL5 133 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 MT-CO2P00403 227 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 HLA-DRB1P01911 266 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 ZP3P21754 424 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 RARRES2Q99969 163 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
SCG3-202ENST00000542355 TRAV1-1A0A0B4J248 108 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 A0A1W2PPV4 95 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 H3BUX3 64 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 SOX15O60248 233 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 CD5P06127 495 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
SCG3-202ENST00000542355 MALP21145 153 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 RND2P52198 227 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PRR20EP86478 221 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PRR20CP86479 221 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PRR20DP86480 221 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PRR20BP86481 221 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PRR20AP86496 221 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 LY6EQ16553 131 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 CIARTQ8N365 385 aaPredicted RBP8.7□□□□□ -1.02
SCG3-202ENST00000542355 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 KCNIP2Q9NS61 270 aa8.7□□□□□ -1.02
SCG3-202ENST00000542355 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
SCG3-202ENST00000542355 MDFIC2A0A1B0GVS7 189 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms