RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-206	ENST00000541836		J3QR06	171 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	TIMM8A	O60220	97 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	LOXL3	P58215	753 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	C12orf54	Q6X4T0	127 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	LRRC29	Q8WV35	223 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	IGHV1-24	A0A0C4DH33	117 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	HSBP1L1	C9JCN9	74 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	FNDC10	F2Z333	226 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	NTN3	O00634	580 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	LEPROTL1	O95214	131 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	PYY	P10082	97 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	FABP6	P51161	128 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	RPS20	P60866	119 aa	Known RBP	11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	PSG9	Q00887	426 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	ZNF841	Q6ZN19	808 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	FAM231D	Q6ZW35	169 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	UBALD2	Q8IYN6	164 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	GUCD1	Q96NT3	240 aa		11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	MCRIP2	Q9BUT9	160 aa	Known RBP	11.16	□□□□□ -0.62
NPIPA1-206	ENST00000541836	GAGE12B	A1L429	117 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836		H0Y8G0	127 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	CRX	O43186	299 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	SGK494	Q96LW2	274 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	LAMTOR5	O43504	91 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	CIDEA	O60543	219 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	TCF24	Q7RTU0	167 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	FAM167A-AS1	Q96KT0	104 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	C19orf24	Q9BVV8	132 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	SLC25A2	Q9BXI2	301 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836	CSTL1	Q9H114	145 aa		11.15	□□□□□ -0.62
NPIPA1-206	ENST00000541836		A0A087X0K7	114 aa		11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PEX7	O00628	323 aa		11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SAA2	P0DJI9	122 aa	Predicted RBP	11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	HIST1H1E	P10412	219 aa	Known RBP	11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SSX8	Q7RTT4	187 aa		11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	DEFB123	Q8N688	67 aa		11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ZC2HC1A	Q96GY0	325 aa		11.15	□□□□□ -0.63
NPIPA1-206	ENST00000541836		K7ERU9	68 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ZNRF1	Q8ND25	227 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	TMEM191A	Q9H0A3	160 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	IGHV3OR15-7	A0A075B7D8	119 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	TRAV8-6	A0A0B4J262	113 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	AGFG2	O95081	481 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	IGHV1-2	P23083	117 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	DEFB127	Q9H1M4	99 aa		11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MED13	Q9UHV7	2174 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	IGKV1D-17	A0A075B6S4	117 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836		A0A1B0GXF2	115 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PCNX2	A6NKB5	2137 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	GNG5	P63218	68 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	HBB	P68871	147 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CT45A1	Q5HYN5	189 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ZNF329	Q86UD4	541 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CT45A3	Q8NHU0	189 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CHRDL1	Q9BU40	450 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PRCD	Q00LT1	54 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	FAM162B	Q5T6X4	162 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ATP5L2	Q7Z4Y8	100 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PMCHL2	Q9BQD1	86 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MRPL32	Q9BYC8	188 aa	Known RBP	11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CALY	Q9NYX4	217 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PRND	Q9UKY0	176 aa		11.13	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MGST3	O14880	152 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PAXX	Q9BUH6	204 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SCRT2	Q9NQ03	307 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	C1RL	Q9NZP8	487 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	F2RL2	O00254	374 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CD5L	O43866	347 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MEOX1	P50221	254 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ZNF137P	P52743	207 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	OR10W1	Q8NGF6	305 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MEGF9	Q9H1U4	602 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	RPH3AL	Q9UNE2	315 aa		11.12	□□□□□ -0.63
NPIPA1-206	ENST00000541836	COX7A2P2	O60397	106 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ZNF138	P52744	262 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CHCHD1	Q96BP2	118 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SELENOK	Q9Y6D0	94 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	TMEM238	C9JI98	176 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PLAU	P00749	431 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	CD69	Q07108	199 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	FAM71F2	Q6NXP2	309 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	MAP1LC3C	Q9BXW4	147 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ABI3	Q9P2A4	366 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PEF1	Q9UBV8	284 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ASPM	Q8IZT6	3477 aa		11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	HEATR1	Q9H583	2144 aa	Known RBP	11.11	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PSMB11	A5LHX3	300 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SNAI2	O43623	268 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	SAP30	O75446	220 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	IGKV1-16	P04430	117 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	HIST1H1A	Q02539	215 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	OR2Z1	Q8NG97	314 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PPP1R35	Q8TAP8	253 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	PGLYRP4	Q96LB8	373 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	C7orf69	Q9H7B7	122 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	ARFGEF3	Q5TH69	2177 aa		11.1	□□□□□ -0.63
NPIPA1-206	ENST00000541836	TEX50	A0A1B0GTY4	177 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms