RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TMEM251Q8N6I4 163 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 ZFHX2Q9C0A1 2572 aaPredicted RBP10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 FAM90A9PA6NNJ1 464 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 PPIAL4DF5H284 164 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 COX7A2P2O60397 106 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 PYYP10082 97 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 HOXC12P31275 282 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 FAM214BQ7L5A3 538 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 LRRC29Q8WV35 223 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 SARAFQ96BY9 339 aa10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 TET2Q6N021 2002 aaPredicted RBP10.54□□□□□ -0.72
SFSWAP-209ENST00000540469 PROP1O75360 226 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 RHOGP84095 191 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 MLANAQ16655 118 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 KLF14Q8TD94 323 aaPredicted RBP10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 GNG7O60262 68 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 PLAUP00749 431 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 TCTAP57738 103 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 TRGV8A0A0C4DH27 118 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 LY6G6EA0A0G2JKS1 128 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 BPIFA4PQ86YQ2 179 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 PPP1R35Q8TAP8 253 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 U3KQA8 63 aa10.53□□□□□ -0.72
SFSWAP-209ENST00000540469 TNRC6BQ9UPQ9 1833 aaKnown RBP10.52□□□□□ -0.72
SFSWAP-209ENST00000540469 C7orf71A4D174 169 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 PRDX2P32119 198 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 PEX7O00628 323 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 TNFSF15O95150 251 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 SLC25A5P05141 298 aaKnown RBP10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 GNG5P63218 68 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 HBBP68871 147 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 DEFB127Q9H1M4 99 aa10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 MAP1BP46821 2468 aaKnown RBP10.52□□□□□ -0.73
SFSWAP-209ENST00000540469 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 GPR183P32249 361 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNF138P52744 262 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNF766Q5HY98 468 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 WDR82Q6UXN9 313 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 SAP25Q8TEE9 199 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 TTTY12Q9BZ98 90 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 JPT1Q9UK76 154 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 PRRC2CQ9Y520 2896 aaKnown RBP10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 IGHV3OR15-7A0A075B7D8 119 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 SLC25A33Q9BSK2 321 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 GVINP1Q7Z2Y8 2422 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 CD5LO43866 347 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 SP1P08047 785 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 HTR1DP28221 377 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 HIST1H1AQ02539 215 aaPredicted RBP10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 KLF5Q13887 457 aaPredicted RBP10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 GTF2H5Q6ZYL4 71 aa10.51□□□□□ -0.73
SFSWAP-209ENST00000540469 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 ARF6P62330 175 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 RBMXL3Q8N7X1 1067 aaKnown RBP10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 WIPF2Q8TF74 440 aaPredicted RBP10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 ABCA1O95477 2261 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 AGFG2O95081 481 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 CXCL12P48061 93 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 IGKV1OR2-108A0A075B7D4 117 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNF134P52741 427 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNRF1Q8ND25 227 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 PRNDQ9UKY0 176 aa10.5□□□□□ -0.73
SFSWAP-209ENST00000540469 CEP192Q8TEP8 1941 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 TMEM265A0A087WTH1 108 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 C15orf65H3BRN8 121 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 P01737 135 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 LIPFP07098 398 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 MORN5Q5VZ52 161 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 CD177Q8N6Q3 437 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 C10orf113Q5VZT2 155 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 FAM71F2Q6NXP2 309 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 LHFPL4Q7Z7J7 247 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 OR2Z1Q8NG97 314 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 C19orf24Q9BVV8 132 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 IDI2-AS1Q9NZ38 188 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 A8MWL6 223 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 SPEM1Q8N4L4 309 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 CNEP1R1Q8N9A8 125 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 RAB37Q96AX2 223 aa10.49□□□□□ -0.73
SFSWAP-209ENST00000540469 IFI27L2Q9H2X8 130 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms