RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 TECTAO75443 2155 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 SPRY3O43610 288 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 CGB3P0DN86 165 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 CGB7P0DN87 165 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 PRCDQ00LT1 54 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 OR2D3Q8NGH3 330 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 CORO2AQ92828 525 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 OR8B2Q96RD0 313 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 ALKBH7Q9BT30 221 aaPredicted RBP11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 ABCA1O95477 2261 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 ROS1P08922 2347 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 REG1AP05451 166 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
SCNN1A-215ENST00000540037 H0YJW9 148 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 TAS2R45P59539 299 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 UBE2G1P62253 170 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 TCF24Q7RTU0 167 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 OR8B3Q8NGG8 313 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 MRPS16Q9Y3D3 137 aaKnown RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 DMXL1Q9Y485 3027 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 UPK2O00526 184 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 TBR1Q16650 682 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 COX19Q49B96 90 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 PATE2Q6UY27 113 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
SCNN1A-215ENST00000540037 KBTBD11-OT1A0A1B0GTJ5 212 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 C21orf140B9A014 251 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 TOMM40O96008 361 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 CA7P43166 264 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 H3BTX0 84 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 REG1BP48304 166 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 CD69Q07108 199 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 PNKDQ8N490 385 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 C22orf15Q8WYQ4 148 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
SCNN1A-215ENST00000540037 PEX7O00628 323 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 BLNKQ8WV28 456 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 Q71RC1 249 aaPredicted RBP11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 MUC15Q8N387 334 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 COMMD5Q9GZQ3 224 aa11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
SCNN1A-215ENST00000540037 H0Y8G0 127 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 ZNF138P52744 262 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 GRAMD2BQ96HH9 432 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 CCL13Q99616 98 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 PAXXQ9BUH6 204 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 SAP30LQ9HAJ7 183 aa11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.6
SCNN1A-215ENST00000540037 TACC2O95359 2948 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 ZNF137PP52743 207 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 ZC2HC1AQ96GY0 325 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
SCNN1A-215ENST00000540037 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms