RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 MAP1LC3BQ9GZQ8 125 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 RNASE7Q9H1E1 156 aaKnown RBP4.32□□□□□ -1.72
MRE11-209ENST00000540013 NANOGQ9H9S0 305 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 WFDC1Q9HC57 220 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 ZNF581Q9P0T4 197 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 SS18L2Q9UHA2 77 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 WASHC3Q9Y3C0 194 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 FAM215AQ9Y5M1 114 aa4.32□□□□□ -1.72
MRE11-209ENST00000540013 CADP27708 2225 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 DSCAMO60469 2012 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 CELSR1Q9NYQ6 3014 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 ACANP16112 2415 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 AKAP9Q99996 3911 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 PDZD2O15018 2839 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 hADV38S2A0JD32 116 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 NKX2-6A6NCS4 301 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 KRBOX1C9JBD0 128 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 F5H5P2 479 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 ISLRO14498 428 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 COX7A2P2O60397 106 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 SS18L1O75177 396 aaPredicted RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 IGHMP01871 453 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 SHBGP04278 402 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 ERP29P30040 261 aaKnown RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 MDH2P40926 338 aaKnown RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 FOXA1P55317 472 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 DNAJB13P59910 316 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 TFF3Q07654 80 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 SSX1Q16384 188 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 AKR1C8PQ5T2L2 129 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 FAAP20Q6NZ36 180 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 LYPD2Q6UXB3 125 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 ZNF497Q6ZNH5 498 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 TMPPEQ6ZT21 453 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 GOLT1AQ6ZVE7 132 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 OR1J4Q8NGS1 313 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 OR9A2Q8NGT5 310 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 OR2T4Q8NH00 348 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 OR52P1PQ8NH57 321 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 RNASE11Q8TAA1 199 aaKnown RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 GNPDA2Q8TDQ7 276 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 ABHD3Q8WU67 409 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 TWIST2Q8WVJ9 160 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 PTX4Q96A99 478 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
MRE11-209ENST00000540013 LINC00527Q9UJ94 153 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 PRNDQ9UKY0 176 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 MTORP42345 2549 aa4.31□□□□□ -1.72
MRE11-209ENST00000540013 HEATR1Q9H583 2144 aaKnown RBP4.3□□□□□ -1.72
MRE11-209ENST00000540013 UBFD1O14562 309 aaKnown RBP4.3□□□□□ -1.72
MRE11-209ENST00000540013 CD5LO43866 347 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 PFDN1O60925 122 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 GABARAPO95166 117 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 ZNF239Q16600 458 aaKnown RBP4.3□□□□□ -1.72
MRE11-209ENST00000540013 ZNF773Q6PK81 442 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 LINC00596Q86U02 117 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 C4orf33Q8N1A6 199 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 SLC25A44Q96H78 314 aaPredicted RBP4.3□□□□□ -1.72
MRE11-209ENST00000540013 DNAJC30Q96LL9 226 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 SH3BGRL3Q9H299 93 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 PLEKHF2Q9H8W4 249 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 UQCC1Q9NVA1 299 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 TAS2R1Q9NYW7 299 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 HIVEP1P15822 2718 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
MRE11-209ENST00000540013 ITPR3Q14573 2671 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 PLCE1Q9P212 2302 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 OTOGQ6ZRI0 2925 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 CSMD2Q7Z408 3487 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 TRAV8-1A0A0A6YYK1 113 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 A0A0X1KG70 313 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 ZNF850A8MQ14 1090 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 LGALS9O00182 355 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 SLC17A3O00476 420 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 IGLV2-8P01709 118 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 OR12D1P0DN82 309 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 KIAA0040Q15053 153 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 FCN2Q15485 313 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 TIMM50Q3ZCQ8 353 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 ABCA11PQ4W5N1 156 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 SAMD13Q5VXD3 122 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 CGB2Q6NT52 195 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 NOXRED1Q6NXP6 359 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 CEMP1Q6PRD7 247 aaPredicted RBP4.29□□□□□ -1.72
MRE11-209ENST00000540013 ATP5L2Q7Z4Y8 100 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 Q8N377 158 aa4.29□□□□□ -1.72
MRE11-209ENST00000540013 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms