RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 IGHV1-69-2A0A0G2JMI3 117 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 A0A0X1KG70 313 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 C9orf170A2RU37 121 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 OR5H14A6NHG9 310 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 H3BSA7 217 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 TXNDC9O14530 226 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SOCS3O14543 225 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 MRASO14807 208 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 CD5LO43866 347 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SRSF10O75494 262 aaKnown RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 TNFSF15O95150 251 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 APOMO95445 188 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 GYPCP04921 128 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 RPS4Y1P22090 263 aaKnown RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 GABRA3P34903 492 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 INPP1P49441 399 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 TAF6P49848 677 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 LHX2P50458 406 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 KLF3P57682 345 aaPredicted RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 CAV1Q03135 178 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 HTR4Q13639 388 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 LTC4SQ16873 150 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SGPP2Q8IWX5 399 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 TMEM86AQ8N2M4 240 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 C12orf45Q8N5I9 185 aaPredicted RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 NPBQ8NG41 125 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 OR1J4Q8NGS1 313 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 DCUN1D4Q92564 292 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 KLK6Q92876 244 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 PDXPQ96GD0 296 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 TMEM101Q96IK0 257 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF436Q9C0F3 470 aaPredicted RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 COMMD5Q9GZQ3 224 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 HMG20AQ9NP66 347 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SCRT2Q9NQ03 307 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 COA4Q9NYJ1 87 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 CALML5Q9NZT1 146 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 MED11Q9P086 117 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 DHCR7Q9UBM7 475 aaKnown RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SLC23A2Q9UGH3 650 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 PRSS21Q9Y6M0 314 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 FAT4Q6V0I7 4981 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 SHANK1Q9Y566 2161 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 ESPL1Q14674 2120 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 DNAH7Q8WXX0 4024 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 DOCK6Q96HP0 2047 aa2.75□□□□□ -1.97
AC055720.1-201ENST00000539552 CNTRLQ7Z7A1 2325 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 DYSFO75923 2080 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 TRBV19A0A075B6N1 114 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 TMEM72A0PK05 275 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RIIAD1A6NNX1 92 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 DEDDO75618 318 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 TNFSF13O75888 250 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 SERF1AO75920 110 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 GABARAPO95166 117 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 IGLV2-8P01709 118 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RPL7P18124 248 aaKnown RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 PPIBP23284 216 aaKnown RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RPS3P23396 243 aaKnown RBP eCLIP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 IMPA1P29218 277 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 POLR2HP52434 150 aaKnown RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 WNT4P56705 351 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RRAS2P62070 204 aaPredicted RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 PPP1CAP62136 330 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RAP1AP62834 184 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 PSG9Q00887 426 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 GRK1Q15835 563 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 TIMM50Q3ZCQ8 353 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 MORN2Q502X0 79 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 HAGHLQ6PII5 290 aaPredicted RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 LYPD2Q6UXB3 125 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF497Q6ZNH5 498 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF584Q8IVC4 421 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 EXOC3-AS1Q8N2X6 119 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF664Q8N3J9 261 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 YIPF7Q8N8F6 280 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 LINC01555Q8NAE3 123 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF555Q8NEP9 628 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ADAT3Q96EY9 351 aaPredicted RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 VSIG2Q96IQ7 327 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 C18orf15Q96N68 181 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF382Q96SR6 550 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 NMNAT3Q96T66 252 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 LITAFQ99732 161 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 THTPAQ9BU02 230 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 TBL1XR1Q9BZK7 514 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 C20orf27Q9GZN8 174 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 CDC42EP4Q9H3Q1 356 aaKnown RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 PDFQ9HBH1 243 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 SDF2L1Q9HCN8 221 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 GPR84Q9NQS5 396 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 RBM7Q9Y580 266 aaKnown RBP2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 U3KQ87 197 aa2.74□□□□□ -1.97
AC055720.1-201ENST00000539552 BAZ2BQ9UIF8 2168 aaKnown RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 IGKV6D-21A0A0A0MT36 114 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms