RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 TET1Q8NFU7 2136 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 EVI2AP22794 236 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 OR10J3Q5JRS4 329 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 SPACA3Q8IXA5 215 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 CIARTQ8N365 385 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-220ENST00000529526 DNAL4O96015 105 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 RHOGP84095 191 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 ZNF600Q6ZNG1 722 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 GGNQ86UU5 652 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 RNF125Q96EQ8 232 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 IGKV1-27A0A075B6S5 117 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 MLNRO43193 412 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM50AO95807 157 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 CD59P13987 128 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 LDLRAD2Q5SZI1 272 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 MRPS16Q9Y3D3 137 aaKnown RBP6.75□□□□□ -1.33
CTNND1-220ENST00000529526 A0A087WWC5 75 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 TCRBV4S1A1TA0A5B7 111 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 DUTP33316 252 aaKnown RBP6.75□□□□□ -1.33
CTNND1-220ENST00000529526 LINC00469Q8N7U9 141 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 JKAMPQ9P055 326 aa6.75□□□□□ -1.33
CTNND1-220ENST00000529526 MDC1Q14676 2089 aaKnown RBP6.74□□□□□ -1.33
CTNND1-220ENST00000529526 APOMO95445 188 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 HOXA5P20719 270 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 KLRD1Q13241 179 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 TRAV40A0A0B4J280 105 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 C5orf63A6NC05 138 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 ATP5LO75964 103 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-220ENST00000529526 CRYGSP22914 178 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 Q0VFX4 171 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 STHQ8IWL8 128 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 KNTC1P50748 2209 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 NTN3O00634 580 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-220ENST00000529526 CLPSP04118 112 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 PAX1P15863 534 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 CD33P20138 364 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 NABP1Q96AH0 204 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 DNAJC13O75165 2243 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 TYMSP04818 313 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 EFNB3Q15768 340 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 NSUN5P1Q3KNT7 163 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 PEF1Q9UBV8 284 aaKnown RBP6.74□□□□□ -1.33
CTNND1-220ENST00000529526 SCN5AQ14524 2016 aa6.74□□□□□ -1.33
CTNND1-220ENST00000529526 GAS1P54826 345 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 C10orf55Q5SWW7 151 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-220ENST00000529526 TDGF1P13385 188 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 CACNG7P62955 275 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 SPATA31B1PQ5VZV4 182 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 TTC9CQ8N5M4 171 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM167AQ8TBQ9 72 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 RP1L1Q8IWN7 2480 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-220ENST00000529526 NAPSAO96009 420 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 PRCDQ00LT1 54 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 PVRIGQ6DKI7 326 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM219Q86XT9 240 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 C10orf126Q8N4M7 172 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 FABP5P3A8MUU1 101 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 SRSF6Q13247 344 aaKnown RBP6.73□□□□□ -1.33
CTNND1-220ENST00000529526 ZNF585BQ52M93 769 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 RNF144BQ7Z419 303 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 OCC1Q8TAD7 63 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 NRN1Q9NPD7 142 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 METRNQ9UJH8 293 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 GZMBP10144 247 aa6.73□□□□□ -1.33
CTNND1-220ENST00000529526 F8VVB4 439 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 F8VWA3 439 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 H3BRM9 83 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 LILRA1O75019 489 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 PSG8Q9UQ74 426 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 RFNGQ9Y644 331 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 LTBP1Q14766 1721 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-220ENST00000529526 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-220ENST00000529526 C3orf36Q3SXR2 165 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 DMRTA1Q5VZB9 504 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 ST20Q9HBF5 79 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 CD177Q8N6Q3 437 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 FBLN5Q9UBX5 448 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 SEC16AO15027 2179 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 IGHV2-26A0A0B4J1V2 119 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 MYOD1P15172 320 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 RPL15P61313 204 aaKnown RBP6.72□□□□□ -1.33
CTNND1-220ENST00000529526 Q6AWC8 147 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 NPFFR1Q9GZQ6 430 aa6.72□□□□□ -1.33
CTNND1-220ENST00000529526 ZNF581Q9P0T4 197 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms