RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FAM212BQ9NTI7 297 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 CLN6Q9NWW5 311 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 BET1LQ9NYM9 111 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 KCNIP1Q9NZI2 227 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 METTL1Q9UBP6 276 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 SMPXQ9UHP9 88 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 KIF25Q9UIL4 384 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 LAMP5Q9UJQ1 280 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 RNF24Q9Y225 148 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 FAM32AQ9Y421 112 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 HLA-DRB4X5D2U9 266 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 TRAV6A0A075B6T7 132 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 IGKV1-9A0A0C4DH69 117 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 IGKV1-12A0A0C4DH73 117 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 LOC107986453A0A1B0GWG9 222 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 LRCOL1A6NCL2 159 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TMEM212A6NML5 194 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ZNF736B4DX44 427 aaPredicted RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 M0R2N4 97 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CORTO00230 105 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 SIRPB1O00241 398 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CHEK1O14757 476 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 SIVA1O15304 175 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 MAGEB4O15481 346 aaPredicted RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 GSTZ1O43708 216 aaPredicted RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 IGKV1D-12P01611 117 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TRBV12-3P01733 135 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 HBZP02008 142 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 HBE1P02100 147 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 IGKV1-16P04430 117 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CDK1P06493 297 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CD37P11049 281 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 PSKH1P11801 424 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CD36P16671 472 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ATF1P18846 271 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 M6PRP20645 277 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CDKN1BP46527 198 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ARPC4P59998 168 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 SNRPD3P62318 126 aaKnown RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 CNBPP62633 177 aaKnown RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 LIPEQ05469 1076 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 STX3Q13277 289 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 UNC119Q13432 240 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 MED21Q13503 144 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ATXN7L3Q14CW9 347 aaPredicted RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 ARL6IP1Q15041 203 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 KISS1Q15726 138 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ATP6AP1Q15904 470 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CNPY1Q3B7I2 92 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CCDC58Q4VC31 144 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 LINC01556Q5JQF7 62 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 PAGE3Q5JUK9 113 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TMEM69Q5SWH9 247 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 NXNL2Q5VZ03 156 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 KDM4DQ6B0I6 523 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ZNF322Q6U7Q0 402 aaPredicted RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 FOXI2Q6ZQN5 318 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ASRGL1Q7L266 308 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 SSX7Q7RTT5 188 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TCF24Q7RTU0 167 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ERI1Q8IV48 349 aaKnown RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 MICU2Q8IYU8 434 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 PUSL1Q8N0Z8 303 aaKnown RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 SYS1Q8N2H4 156 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CBR4Q8N4T8 237 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 MS4A15Q8N5U1 240 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 NKAIN3Q8N8D7 197 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 GDPD1Q8N9F7 314 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 SUMF2Q8NBJ7 301 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR4C16Q8NGL9 310 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR9I1Q8NGQ6 314 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR6K6Q8NGW6 343 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR1P1Q8NH06 330 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR5B3Q8NH48 314 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR10A6Q8NH74 314 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TMEM167AQ8TBQ9 72 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 DCANP1Q8TF63 244 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 GGHQ92820 318 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 TLCD1Q96CP7 247 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 NRBF2Q96F24 287 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 NIPSNAP1Q9BPW8 284 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CHCHD7Q9BUK0 85 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CHST6Q9GZX3 395 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 METTL9Q9H1A3 318 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 FBXL15Q9H469 300 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 NRN1Q9NPD7 142 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR2S2Q9NQN1 319 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 CYTL1Q9NRR1 136 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 GID8Q9NWU2 228 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 IMPAD1Q9NX62 359 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 COA4Q9NYJ1 87 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 ABRACLQ9P1F3 81 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 WARS2Q9UGM6 360 aaKnown RBP0.93□□□□□ -2.26
CD44-212ENST00000524922 CACFD1Q9UGQ2 172 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 VAX2Q9UIW0 290 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 OR52A1Q9UKL2 312 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 KLK12Q9UKR0 248 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 PKIGQ9Y2B9 76 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 GSTK1Q9Y2Q3 226 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms